Pairwise Alignments

Query, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., Periplasmic dipeptide transport protein from Azospirillum sp. SherDot2

 Score =  144 bits (363), Expect = 8e-39
 Identities = 136/498 (27%), Positives = 219/498 (43%), Gaps = 45/498 (9%)

Query: 13  IAAGLSFGAMA-ADITVAY--DADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQK-MEFE 68
           +AA L+  A A A  T+ Y  +  P + +P    +G +  ++  V++ L++F     +  
Sbjct: 12  MAAALALSAPAQAAKTLVYCSEGSPENFNPMLNTTGTSFDVALPVYNNLVQFEHGGTKVV 71

Query: 69  PRLAESWQRVDNETM-RFTLRKGVKFHSGNDF------TADDVVWTFNRLKESAD----- 116
           P LAESW   D+  +  F LR G K+HS  DF       ADDV+++F R  +        
Sbjct: 72  PGLAESWTISDDGLVYTFKLRAGAKWHSVGDFKPTRDANADDVIFSFERQWKPEHPFHKI 131

Query: 117 -------FKGIFEP--LVSLTKVDDYTIEIK-TAGTYPLIENVATYIFPMDSKFYTGTTA 166
                  F  +  P  L S+ KVDD T++    A   P + N+A    P+ S  Y     
Sbjct: 132 SGGAYDYFNDMAMPKLLKSIEKVDDLTVKFTLNAVEAPFLANLAMPFAPIMSAEYG---- 187

Query: 167 DGKNKAEIVKHGNSFASENIS-GTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTL 225
                A ++K G     + +  GTGPF   A ++   + ++    YW    K  +D L  
Sbjct: 188 -----AMLLKKGTPEKLDQVPVGTGPFQFVAYQKDAVIRYKAFEQYW--GGKQPLDNLVF 240

Query: 226 AVIKEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPA 285
           A+  + A R+A L +    ++   +P D   +K    + +    G  V     N    P 
Sbjct: 241 AITPDAAVRLAKLKANECQIMPYPNPADIDGMKKDTSIVVQEQEGLNVGYVSFNVTKKP- 299

Query: 286 LKDVRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYAGYNENLKPR-FDLNKAKELM 344
             DVRVR+A+  A++ +  V  V + A   A    P     YN+ ++   +D+ +AK+L+
Sbjct: 300 FDDVRVRRAVSMALDKKATVAAVYQAAGVPAKNPIPPTMWSYNDAIEDYPYDVERAKKLL 359

Query: 345 KEAGYEKGFNLTMIA-PNNRYVND--EKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDK 401
            +AGY  GF   + A P  R  N   +++A+   A L+K+GIK  +      +Y     +
Sbjct: 360 ADAGYPNGFETDLWAMPVQRPYNPNAKRVAEMMQADLAKVGIKAKIVQYEWGEYRKRMQQ 419

Query: 402 CAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDL 461
               M M+GW  D  D  NF    T+        G  N   + N E D LV  A   TD+
Sbjct: 420 GEHQMGMLGWTGDNGDPDNF--LYTLLGCEAARPGGNNLSKWCNKEFDDLVVQAKRTTDI 477

Query: 462 EKRSTMLKKVEEILYNEA 479
             R+ + ++ + I   EA
Sbjct: 478 AARTKLYEQAQVIFKEEA 495