Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  420 bits (1080), Expect = e-122
 Identities = 228/556 (41%), Positives = 351/556 (63%), Gaps = 37/556 (6%)

Query: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP- 60
           +L+E+++L +E+ +    H  V +++ DI+RGE + +VGESG+GKS   ++++ LL  P 
Sbjct: 5   NLIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYPL 64

Query: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120
                G +   G+ +  L  + +R +RG++I  IFQ+PMTSLNPL ++E Q+ E +  + 
Sbjct: 65  ARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHK 124

Query: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180
            +  + A QR L L+  VGIP+P  RLK  PH+ SGG RQRV+IA+ALA EP+L+IADEP
Sbjct: 125 GLQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184

Query: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240
           TTALDV++Q +IL L++EL  +  +  +L++HD+ +V  +  RV VM +G +VE      
Sbjct: 185 TTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCET 244

Query: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300
           +  +P+HPYT+ L++A P                           S+ +G          
Sbjct: 245 LFQSPQHPYTQELLAAEPSG----------------------GPASNAIGP--------- 273

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           PLL+V+N+ + F  K     +  +YV+A + ++F++ +G+T G+VGESGSGKST+   I 
Sbjct: 274 PLLEVDNLKVWFPIKKGFLRNTVDYVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAIL 333

Query: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420
            L     G + FEG  L  L S+ + RPLRR+MQ+VFQ+P+ S++PRM + +I+ E +R 
Sbjct: 334 RLIASKGG-IRFEGQQLDTL-SQQQVRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRI 391

Query: 421 HKL-TRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICD 479
           HK+ T +E E   I    L+ VGL   +  +YPHEFSGGQRQRI+IARAL  +PRL++ D
Sbjct: 392 HKMGTPAEQEAAIIA--ALKEVGLDPESRHRYPHEFSGGQRQRIAIARALVLKPRLILLD 449

Query: 480 EPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPT 539
           EPTSALD +VQ Q++ LL+ LQ + NLT LFISHDL V++ +  ++ V++ G ++E    
Sbjct: 450 EPTSALDRTVQRQVVELLRSLQTKYNLTYLFISHDLAVVKALSHQLMVVKHGQVVEQGDA 509

Query: 540 EQLFTDPQHEYSKKLI 555
            ++F  PQH Y+++L+
Sbjct: 510 AEIFAAPQHGYTRQLL 525



 Score =  186 bits (473), Expect = 2e-51
 Identities = 114/265 (43%), Positives = 161/265 (60%), Gaps = 15/265 (5%)

Query: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361
           L+++ ++++ FVT D        + +  NNVSF +  GET  LVGESGSGKS  A  I  
Sbjct: 6   LIEIRDLSVEFVTGD-------HHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILR 58

Query: 362 LY-----QPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAE 416
           L      +  +G + + G DL  LK +  R     ++ M+FQ P TS+NP   I   I E
Sbjct: 59  LLPYPLARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINE 118

Query: 417 PIRFHKLTRSESETRQIVNDLLEHVGLGKM-AGLK-YPHEFSGGQRQRISIARALATRPR 474
            +  HK  + +  T++ + +LL+ VG+ +    LK  PHE SGGQRQR+ IA ALA  P 
Sbjct: 119 VLGLHKGLQGKVATQRTL-ELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPE 177

Query: 475 LLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLL 534
           LLI DEPT+ALDV+VQ +IL LLK+LQ  L + +L ISHDL ++R++  RV VMQ G ++
Sbjct: 178 LLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIV 237

Query: 535 EVAPTEQLFTDPQHEYSKKLISLMP 559
           E A  E LF  PQH Y+++L++  P
Sbjct: 238 EQADCETLFQSPQHPYTQELLAAEP 262



 Score =  169 bits (429), Expect = 2e-46
 Identities = 96/261 (36%), Positives = 157/261 (60%), Gaps = 15/261 (5%)

Query: 3   LLEVKNLRIEYPSRHGVHA-------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           LLEV NL++ +P + G          AV  +   + +G+ +G+VGESG+GKST+G A++ 
Sbjct: 275 LLEVDNLKVWFPIKKGFLRNTVDYVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILR 334

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           L++  G I        G+++  LS Q +R +R  ++  +FQDP  SL+P   V   + E 
Sbjct: 335 LIASKGGIR-----FEGQQLDTLSQQQVRPLR-REMQVVFQDPFGSLSPRMCVSEIVGEG 388

Query: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175
           +  +   +  E     ++ +K+VG+  PE+R  +YPH+FSGG RQR+ IA AL  +P LI
Sbjct: 389 LRIHKMGTPAEQEAAIIAALKEVGL-DPESR-HRYPHEFSGGQRQRIAIARALVLKPRLI 446

Query: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235
           + DEPT+ALD ++Q Q++ L+R L  K N+  + ++HD+ VV  ++ ++ V+  G +VE 
Sbjct: 447 LLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLFISHDLAVVKALSHQLMVVKHGQVVEQ 506

Query: 236 GPTAKVLGTPEHPYTRSLISA 256
           G  A++   P+H YTR L+ A
Sbjct: 507 GDAAEIFAAPQHGYTRQLLEA 527