Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  414 bits (1064), Expect = e-120
 Identities = 225/556 (40%), Positives = 351/556 (63%), Gaps = 39/556 (7%)

Query: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60
           M+L+E+++L + +  +      V++L+LD++ GE + +VGESG+GKS   ++++ LL   
Sbjct: 1   MNLIEIRDLSVAFSGQ----TVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEA 56

Query: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120
           GT   G +   G+++ G S   ++++RG++I  IFQ+PMTSLNPL ++E Q+ ET+  + 
Sbjct: 57  GTETTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHK 116

Query: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180
            +  + A  R L L+  VGI +P+ RLK YPHQ SGG RQRV+IA+ALA EP+L+IADEP
Sbjct: 117 GLGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEP 176

Query: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240
           TTALDV++Q +IL L++ L K+  +  +L++HD+ +V ++  RV VM  G++VE      
Sbjct: 177 TTALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQT 236

Query: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300
           +   P+HPY+R L+ A P +D                                D R+   
Sbjct: 237 LFNAPQHPYSRLLLDAEPDAD----------------------------ALCSDERE--- 265

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
            +L+V+++ ++F     LF  R+ Y++A + +S +V  G+T G+VGESGSGKST+ + I 
Sbjct: 266 TVLQVDDLTVQFRLGGGLFR-RKTYLRAVDGISLSVQRGKTLGIVGESGSGKSTLGQAIL 324

Query: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420
            L   + G + F+G  L  L ++ + RP R+QMQ+VFQ+PY S++PRM +  II+E +  
Sbjct: 325 RLLD-STGSIRFQGEALDPLNNQ-QMRPWRKQMQVVFQDPYGSLSPRMTVEQIISEGLEV 382

Query: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480
           H          Q++  +L+ VGL   +  +YPHEFSGGQRQRI+IARAL  +P L++ DE
Sbjct: 383 HAPCSLADRDAQVI-QVLKDVGLDPASRHRYPHEFSGGQRQRIAIARALVLKPALMLLDE 441

Query: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540
           PTSALD +VQ Q++ LL++LQD+  LT LFISHDL V+R M   + V++ G ++E   + 
Sbjct: 442 PTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVERGASH 501

Query: 541 QLFTDPQHEYSKKLIS 556
            +F  PQH Y+K+L++
Sbjct: 502 AVFDAPQHPYTKELLA 517



 Score =  170 bits (431), Expect = 1e-46
 Identities = 97/261 (37%), Positives = 159/261 (60%), Gaps = 14/261 (5%)

Query: 2   SLLEVKNLRIEYPSRHGVHA------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           ++L+V +L +++    G+        AV  ++L +QRG+ +G+VGESG+GKST+G A++ 
Sbjct: 266 TVLQVDDLTVQFRLGGGLFRRKTYLRAVDGISLSVQRGKTLGIVGESGSGKSTLGQAILR 325

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           LL   G+I        GE +  L+ Q MR  R  ++  +FQDP  SL+P  TVE  ++E 
Sbjct: 326 LLDSTGSIR-----FQGEALDPLNNQQMRPWR-KQMQVVFQDPYGSLSPRMTVEQIISEG 379

Query: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175
           +  +   S  +   + + ++K VG+  P +R  +YPH+FSGG RQR+ IA AL  +P L+
Sbjct: 380 LEVHAPCSLADRDAQVIQVLKDVGL-DPASR-HRYPHEFSGGQRQRIAIARALVLKPALM 437

Query: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235
           + DEPT+ALD ++Q Q++ L+REL  K  +  + ++HD+ VV  +   + V+  G +VE 
Sbjct: 438 LLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVER 497

Query: 236 GPTAKVLGTPEHPYTRSLISA 256
           G +  V   P+HPYT+ L++A
Sbjct: 498 GASHAVFDAPQHPYTKELLAA 518



 Score =  169 bits (427), Expect = 3e-46
 Identities = 106/241 (43%), Positives = 142/241 (58%), Gaps = 9/241 (3%)

Query: 331 NVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVT-----FEGIDLTALKSEHE 385
           N+S  V  GE   LVGESGSGKS  A  I  L  P AG  T     + G +L    +   
Sbjct: 21  NLSLDVRPGECLALVGESGSGKSVTAHSILQLL-PEAGTETTGSIQYRGQELIGASAATL 79

Query: 386 RRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGK 445
           ++    ++ M+FQ P TS+NP   I   I E +  HK    ++   +I+ +LL+ VG+ K
Sbjct: 80  QKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGKAAQARIL-ELLDLVGIQK 138

Query: 446 -MAGLK-YPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDE 503
               LK YPH+ SGGQRQR+ IA ALA  P LLI DEPT+ALDV+VQ +IL LLK LQ  
Sbjct: 139 PQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKSLQKR 198

Query: 504 LNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMPEFTG 563
           L +++L ISHDL ++R +  RV VM+ G ++E A  + LF  PQH YS+ L+   P+   
Sbjct: 199 LGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNAPQHPYSRLLLDAEPDADA 258

Query: 564 L 564
           L
Sbjct: 259 L 259