Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  388 bits (997), Expect = e-112
 Identities = 217/559 (38%), Positives = 332/559 (59%), Gaps = 37/559 (6%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           +L V++L+IE   RHG    V  L+ +++ GE + VVGESG+GK+    A++ LL PPG 
Sbjct: 12  VLSVEHLKIEL--RHGARPLVHDLSFEVKPGEFLAVVGESGSGKTMAARAILQLL-PPGI 68

Query: 63  I-AGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121
           +  GG +  +GE ++   P+AMR +RG  IG +FQ+PM SLNP+  +  Q+ E +  + Q
Sbjct: 69  LQTGGRIVFDGEDLAARDPKAMRPIRGPGIGMVFQEPMVSLNPVHRIGEQMAEGLRMHTQ 128

Query: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181
           + A E   R L ++++V I  PE  +  YPH+FSGGMRQR+++A  +  +P L+IADEPT
Sbjct: 129 LPAAEIRARILDMLRRVQIADPERCMHAYPHEFSGGMRQRIMLASVMLLKPRLLIADEPT 188

Query: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241
           TALD   Q ++L+L+  L + N    +L+TH++G+V     R  V+ +G LVE G    +
Sbjct: 189 TALDTLSQREVLDLMVGLARDNGTAVLLITHNLGLVGRYAQRAIVLEKGQLVETGDVPGI 248

Query: 242 LGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTGP 301
           L  P+ PYTR L+ A+PR                 +  KP         Q    R+   P
Sbjct: 249 LVAPKQPYTRKLVDALPRR----------------QAAKP---------QGDAPRQ---P 280

Query: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361
           L++V ++ + F    +    R   V   +++   +H GE   LVG SGSGK+T+ R I  
Sbjct: 281 LVQVRSLCVSFSGARAGLFKRHAPVHVIDSLDLDIHPGEMVALVGGSGSGKTTLGRAILR 340

Query: 362 LYQPNAGRVTFEGIDL-TALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420
           L    +G++ F G D+ TA ++   R   R   Q+VFQ+P++S++PRM++ DI+AEP+R 
Sbjct: 341 LAPSQSGQILFRGEDVRTAGRAALHR--FRLACQLVFQDPFSSLDPRMRVQDIVAEPLRH 398

Query: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480
                + +  R+ V + L+ VGL  + G +YPHE SGGQRQR++IARAL  RP  ++ DE
Sbjct: 399 LPSLDAAARVRR-VKETLDEVGLDGL-GARYPHELSGGQRQRVAIARALVRRPAFVVADE 456

Query: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540
           P SALD+++QAQ+L+L + LQ       LFISHDL  + Q+ DRV VM+ G ++E    +
Sbjct: 457 PVSALDMTIQAQVLSLFQSLQQHHGFACLFISHDLAAVEQIADRVIVMERGRIVEQGARD 516

Query: 541 QLFTDPQHEYSKKLISLMP 559
            +F DP+H Y++ L++  P
Sbjct: 517 AVFDDPRHAYTQALLAATP 535



 Score =  164 bits (415), Expect = 9e-45
 Identities = 95/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%)

Query: 3   LLEVKNLRIEYPS-------RHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           L++V++L + +         RH     + SL LDI  GE+V +VG SG+GK+T+G A++ 
Sbjct: 281 LVQVRSLCVSFSGARAGLFKRHAPVHVIDSLDLDIHPGEMVALVGGSGSGKTTLGRAILR 340

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           L         G++   GE +      A+   R +    +FQDP +SL+P   V+  + E 
Sbjct: 341 LAPSQS----GQILFRGEDVRTAGRAALHRFRLA-CQLVFQDPFSSLDPRMRVQDIVAEP 395

Query: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175
           +     + A    +R    + +VG+   +    +YPH+ SGG RQRV IA AL   P  +
Sbjct: 396 LRHLPSLDAAARVRRVKETLDEVGL---DGLGARYPHELSGGQRQRVAIARALVRRPAFV 452

Query: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235
           +ADEP +ALD++IQ Q+L+L + L + +   C+ ++HD+  V  + DRV VM RG +VE 
Sbjct: 453 VADEPVSALDMTIQAQVLSLFQSLQQHHGFACLFISHDLAAVEQIADRVIVMERGRIVEQ 512

Query: 236 GPTAKVLGTPEHPYTRSLISAVPRSDRKLDRFP 268
           G    V   P H YT++L++A PR    LD  P
Sbjct: 513 GARDAVFDDPRHAYTQALLAATPRPLASLDIAP 545