Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA from Variovorax sp. SCN45

 Score =  442 bits (1136), Expect = e-128
 Identities = 248/564 (43%), Positives = 353/564 (62%), Gaps = 10/564 (1%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG- 61
           +L V +L + + +      AVK L+  +  GE + VVGESG+GKS    A++ L+   G 
Sbjct: 13  VLAVDDLTVRFSTSERTVDAVKKLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGG 72

Query: 62  TIAGGEVYL---NGE--KISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETI 116
            I GG +     NGE   ++      MR +RG+ I  IFQ+PMTSLNP+FT   Q+ E I
Sbjct: 73  RILGGSMAFRRRNGEVLDLAQARDSTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEAI 132

Query: 117 HANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLII 176
             +   S   A   AL +++ V IP+  N L ++PHQ SGGMRQRV+IA+AL+ +P L+I
Sbjct: 133 RIHQGKSDSAARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLI 192

Query: 177 ADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFG 236
           ADEPTTALDV+IQ QIL LIREL K+  +G + +THDMGVV+ + DRV VMYRGD VE G
Sbjct: 193 ADEPTTALDVTIQAQILQLIRELQKEMRMGVLFITHDMGVVAEIADRVLVMYRGDKVEAG 252

Query: 237 PTAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDH- 295
            +  V   P+HPYTR+L+SAVP+    +    L +  +  +   P D         QD  
Sbjct: 253 SSDTVFAAPQHPYTRALLSAVPKLG-AMQGTDLPAKFDLLRTESPADAAPPEPATPQDTV 311

Query: 296 RKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTI 355
           R+  GP+L+V ++  RF  +  LF   +  V A   +SF ++ GET  LVGESG GKST 
Sbjct: 312 REDAGPILRVRDLVTRFDVRSGLFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTT 371

Query: 356 ARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIA 415
            R +  L +  +G + F G ++  L +  E + LRR +Q +FQ+P+ S++PR+ +   I 
Sbjct: 372 GRSLLRLVESQSGAIEFGGQNIRELPT-RELQALRRNIQFIFQDPFASLDPRVTVGFSIM 430

Query: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRL 475
           EP+  H + +  +E +Q V+ LL+ VGL      +YPHEFSGGQRQRI+IARALA  P++
Sbjct: 431 EPLLIHGIAKG-AEAQQRVDWLLQKVGLPPEVAQRYPHEFSGGQRQRIAIARALALNPKV 489

Query: 476 LICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLE 535
           ++ DE  SALDVS+QAQI+NL+ DLQ EL +  LFISHD+ V+ ++  RV VM +G ++E
Sbjct: 490 VVADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIVE 549

Query: 536 VAPTEQLFTDPQHEYSKKLISLMP 559
           + P   +F  PQH Y++KL++ +P
Sbjct: 550 IGPRRAVFEAPQHAYTRKLMAAVP 573



 Score =  186 bits (471), Expect = 3e-51
 Identities = 108/266 (40%), Positives = 161/266 (60%), Gaps = 14/266 (5%)

Query: 3   LLEVKNLRIEYPSRHGVHA-------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           +L V++L   +  R G+         AV+ ++ D+  GE + +VGESG GKST G +++ 
Sbjct: 318 ILRVRDLVTRFDVRSGLFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTTGRSLLR 377

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           L+        G +   G+ I  L  + ++ +R + I FIFQDP  SL+P  TV   + E 
Sbjct: 378 LVESQS----GAIEFGGQNIRELPTRELQALRRN-IQFIFQDPFASLDPRVTVGFSIMEP 432

Query: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175
           +  +      EA QR   L+++VG+P PE   ++YPH+FSGG RQR+ IA ALA  P ++
Sbjct: 433 LLIHGIAKGAEAQQRVDWLLQKVGLP-PEVA-QRYPHEFSGGQRQRIAIARALALNPKVV 490

Query: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235
           +ADE  +ALDVSIQ QI+NL+ +L ++  V  + ++HDM VV  ++ RVAVMY G +VE 
Sbjct: 491 VADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIVEI 550

Query: 236 GPTAKVLGTPEHPYTRSLISAVPRSD 261
           GP   V   P+H YTR L++AVP +D
Sbjct: 551 GPRRAVFEAPQHAYTRKLMAAVPVAD 576



 Score =  179 bits (455), Expect = 2e-49
 Identities = 105/278 (37%), Positives = 161/278 (57%), Gaps = 20/278 (7%)

Query: 300 GPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVI 359
           G +L V+++ +RF T +         V A   +SF V  GET  +VGESGSGKS  +  +
Sbjct: 11  GRVLAVDDLTVRFSTSERT-------VDAVKKLSFHVDHGETLAVVGESGSGKSVTSLAL 63

Query: 360 AGLYQPNAGRV----------TFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMK 409
             L +   GR+            E +DL   +    R      + M+FQ P TS+NP   
Sbjct: 64  MRLVEHGGGRILGGSMAFRRRNGEVLDLAQARDSTMRGIRGADIAMIFQEPMTSLNPVFT 123

Query: 410 IFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIAR 467
             D IAE IR H+  +S+S  R     +LE V + +   +  ++PH+ SGG RQR+ IA 
Sbjct: 124 AGDQIAEAIRIHQ-GKSDSAARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAM 182

Query: 468 ALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGV 527
           AL+ +P+LLI DEPT+ALDV++QAQIL L+++LQ E+ + +LFI+HD+ V+ ++ DRV V
Sbjct: 183 ALSCKPQLLIADEPTTALDVTIQAQILQLIRELQKEMRMGVLFITHDMGVVAEIADRVLV 242

Query: 528 MQMGTLLEVAPTEQLFTDPQHEYSKKLISLMPEFTGLR 565
           M  G  +E   ++ +F  PQH Y++ L+S +P+   ++
Sbjct: 243 MYRGDKVEAGSSDTVFAAPQHPYTRALLSAVPKLGAMQ 280