Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  387 bits (995), Expect = e-112
 Identities = 222/559 (39%), Positives = 339/559 (60%), Gaps = 38/559 (6%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           L+EV++L + Y        A++ L+  + +GE + VVGESG+GKST+ NA++ LL     
Sbjct: 6   LIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGNAR 65

Query: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHA--NM 120
           I  G+++++G  ++  S +A R++RG  IG + QDPM SLNP   +  Q+ E +      
Sbjct: 66  IDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARGR 125

Query: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180
           +   +EA  + L+L+ QVG+ +P  R +QYPH+ SGGMRQRV+IAIALAGEP LIIADEP
Sbjct: 126 RYPGQEA--KVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLIIADEP 183

Query: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240
           T+ALDV++Q +IL+ ++ L  +  +  +++THD+G+  +  DR+ VM +G+ VE G   +
Sbjct: 184 TSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGSPRQ 243

Query: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300
           +L     PYTR+L+ A P            +++   +   P        GQ+        
Sbjct: 244 ILWGARQPYTRALLDAAP------------AFVPRRRPAAPR-------GQT-------- 276

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           PLL++ +V  RF         + E+  A +++S  +H G+T  +VGESGSGKST  R+  
Sbjct: 277 PLLRLSHVGKRFE-----LPGKNEHYTALHDLSLELHAGQTLAIVGESGSGKSTALRIAL 331

Query: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420
           GL +P+ G+V F G D+T   +  + RPLRR++Q+V QNP+ +++PR  +FD + EP+  
Sbjct: 332 GLEKPSQGQVVFAGEDVTGY-TWSQFRPLRRRIQLVQQNPFAALDPRFTVFDSVVEPLVS 390

Query: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480
             L R E+  R+   +L+  V L      + P E SGGQRQR++IARALA  P +L+ DE
Sbjct: 391 FGLLRGEALERK-ARELITRVQLPVQFLDRLPRELSGGQRQRVAIARALALEPEVLLLDE 449

Query: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540
           P SALDVSVQAQIL LL +LQ EL +  + +SHDL V+  M D+V V++ G ++E  P  
Sbjct: 450 PVSALDVSVQAQILALLDELQRELGMAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPAL 509

Query: 541 QLFTDPQHEYSKKLISLMP 559
           Q+ +     Y++ LI  +P
Sbjct: 510 QVLSKSASAYTRALIDAIP 528



 Score =  163 bits (412), Expect = 2e-44
 Identities = 107/272 (39%), Positives = 161/272 (59%), Gaps = 16/272 (5%)

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           PL++V ++++ +      F  +R   QA   +SF++ +GET  +VGESGSGKST+A  + 
Sbjct: 5   PLIEVRDLSVSYS-----FAGQRS--QALRQLSFSLVQGETLAVVGESGSGKSTLANALL 57

Query: 361 GLYQPNA----GRVTFEGIDLTALKSEHERRPLR-RQMQMVFQNPYTSMNPRMKIFDIIA 415
           GL   NA    G++  +G+D+ A  SE  RR LR R + +V Q+P  S+NP  +I   IA
Sbjct: 58  GLLPGNARIDQGQLWVDGVDM-AQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIA 116

Query: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMA--GLKYPHEFSGGQRQRISIARALATRP 473
           E ++  +  R   +  +++  LL+ VGL + A    +YPHE SGG RQR+ IA ALA  P
Sbjct: 117 EALQLARGRRYPGQEAKVLA-LLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEP 175

Query: 474 RLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTL 533
           RL+I DEPTSALDV+VQ +IL+ L+ L  E  +++L I+HDL +     DR+ VM+ G  
Sbjct: 176 RLIIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQ 235

Query: 534 LEVAPTEQLFTDPQHEYSKKLISLMPEFTGLR 565
           +E     Q+    +  Y++ L+   P F   R
Sbjct: 236 VEHGSPRQILWGARQPYTRALLDAAPAFVPRR 267



 Score =  163 bits (412), Expect = 2e-44
 Identities = 95/255 (37%), Positives = 152/255 (59%), Gaps = 7/255 (2%)

Query: 10  RIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGTIAGGEVY 69
           R E P ++  + A+  L+L++  G+ + +VGESG+GKST     + L  P    + G+V 
Sbjct: 287 RFELPGKNEHYTALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLEKP----SQGQVV 342

Query: 70  LNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQVSAEEAYQ 129
             GE ++G +    R +R  +I  + Q+P  +L+P FTV   + E + +   +  E   +
Sbjct: 343 FAGEDVTGYTWSQFRPLR-RRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALER 401

Query: 130 RALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQ 189
           +A  L+ +V +P     L + P + SGG RQRV IA ALA EP++++ DEP +ALDVS+Q
Sbjct: 402 KARELITRVQLPV--QFLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQ 459

Query: 190 DQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPY 249
            QIL L+ EL ++  +  +LV+HD+ VV+++ D+V V+ RG +VE GP  +VL      Y
Sbjct: 460 AQILALLDELQRELGMAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAY 519

Query: 250 TRSLISAVPRSDRKL 264
           TR+LI A+P   R +
Sbjct: 520 TRALIDAIPGHSRSM 534