Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Enterobacter asburiae PDN3

 Score =  431 bits (1108), Expect = e-125
 Identities = 247/569 (43%), Positives = 352/569 (61%), Gaps = 24/569 (4%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           +L V  L I +        AV++L+  ++RGE + +VGESG+GKS    A++ LL   G 
Sbjct: 12  VLAVHQLNIAFQEERQFIPAVQNLSFTLRRGETLAIVGESGSGKSVTALALMRLLEQTGG 71

Query: 63  IAGGEVYLNGEK------ISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETI 116
               E  L   +      ++ LS   M+ VRG+ I  IFQ+PMTSLNP+F V  Q+ E+I
Sbjct: 72  QISSEKMLLRRRNRQVIDLNELSGSQMQGVRGADIAMIFQEPMTSLNPVFPVGEQIAESI 131

Query: 117 HANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLII 176
             +  +S +EA   A  +++ V IP+ +  L +YPHQ SGGMRQRV+IA+AL+  P ++I
Sbjct: 132 RLHQGLSGDEALNEARRMLELVRIPEAQAILGRYPHQLSGGMRQRVMIAMALSCRPAVLI 191

Query: 177 ADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFG 236
           ADEPTTALDV+IQ QIL LI+ L ++  +G + +THDMGVV+++ DRV VM++G  VE G
Sbjct: 192 ADEPTTALDVTIQAQILQLIKVLQQEMEMGVIFITHDMGVVADIADRVLVMHKGSAVETG 251

Query: 237 PTAKVLGTPEHPYTRSLISAVPR------SDRKLDRFPLVSYIEEAKELKPLDVKSHWLG 290
           P  ++   P HPYT++L++AVPR      SD    RFPL+S   EA E +  +       
Sbjct: 252 PVEQIFHAPVHPYTKALLAAVPRLGAMNGSDLP-RRFPLISL--EASEQQEDE------- 301

Query: 291 QSQDHRKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGS 350
           + QD      P+L+V ++  RF  +  +    +  V A  NVSF +  GET  LVGESG 
Sbjct: 302 REQDTVVPGKPILEVRDLVTRFPLRSGVLNRVKREVHAVENVSFDLWPGETLALVGESGC 361

Query: 351 GKSTIARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKI 410
           GKST  R +  L +   G +TF G  +  L  +   + +RR +Q +FQ+PY S++PR  +
Sbjct: 362 GKSTTGRALLRLVESQEGSITFNGERIDTL-PDSRLQAVRRDIQFIFQDPYASLDPRHTV 420

Query: 411 FDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALA 470
              I EP+R H L   E+  R++   LLE VGL      +YPHEFSGGQRQRI IARALA
Sbjct: 421 GYSIMEPLRVHNLLDGEAAQRRVA-WLLERVGLKPEHAWRYPHEFSGGQRQRICIARALA 479

Query: 471 TRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQM 530
             P+++I DE  SALDVS++AQI+NLL DLQ ++ +  LFISHD+ V+ ++  RV VM M
Sbjct: 480 LNPKVVIADESVSALDVSIRAQIINLLLDLQRDMGIAFLFISHDMAVVERISHRVAVMFM 539

Query: 531 GTLLEVAPTEQLFTDPQHEYSKKLISLMP 559
           G ++E+ P   +F +PQH Y++KLI+ +P
Sbjct: 540 GQIVEIGPRRAVFENPQHPYTRKLIAAVP 568



 Score =  199 bits (505), Expect = 4e-55
 Identities = 113/266 (42%), Positives = 166/266 (62%), Gaps = 14/266 (5%)

Query: 3   LLEVKNLRIEYPSRHGVHA-------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           +LEV++L   +P R GV         AV++++ D+  GE + +VGESG GKST G A++ 
Sbjct: 313 ILEVRDLVTRFPLRSGVLNRVKREVHAVENVSFDLWPGETLALVGESGCGKSTTGRALLR 372

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           L+        G +  NGE+I  L    ++ VR   I FIFQDP  SL+P  TV + + E 
Sbjct: 373 LVESQE----GSITFNGERIDTLPDSRLQAVRRD-IQFIFQDPYASLDPRHTVGYSIMEP 427

Query: 116 IHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175
           +  +  +  E A +R   L+++VG+ +PE+  + YPH+FSGG RQR+ IA ALA  P ++
Sbjct: 428 LRVHNLLDGEAAQRRVAWLLERVGL-KPEHAWR-YPHEFSGGQRQRICIARALALNPKVV 485

Query: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235
           IADE  +ALDVSI+ QI+NL+ +L +   +  + ++HDM VV  ++ RVAVM+ G +VE 
Sbjct: 486 IADESVSALDVSIRAQIINLLLDLQRDMGIAFLFISHDMAVVERISHRVAVMFMGQIVEI 545

Query: 236 GPTAKVLGTPEHPYTRSLISAVPRSD 261
           GP   V   P+HPYTR LI+AVP +D
Sbjct: 546 GPRRAVFENPQHPYTRKLIAAVPVAD 571



 Score =  186 bits (473), Expect = 2e-51
 Identities = 103/261 (39%), Positives = 151/261 (57%), Gaps = 13/261 (4%)

Query: 319 FESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEG---- 374
           F+  R+++ A  N+SF +  GET  +VGESGSGKS  A  +  L +   G+++ E     
Sbjct: 22  FQEERQFIPAVQNLSFTLRRGETLAIVGESGSGKSVTALALMRLLEQTGGQISSEKMLLR 81

Query: 375 ------IDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSES 428
                 IDL  L     +      + M+FQ P TS+NP   + + IAE IR H+   S  
Sbjct: 82  RRNRQVIDLNELSGSQMQGVRGADIAMIFQEPMTSLNPVFPVGEQIAESIRLHQ-GLSGD 140

Query: 429 ETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRPRLLICDEPTSALD 486
           E       +LE V + +   +  +YPH+ SGG RQR+ IA AL+ RP +LI DEPT+ALD
Sbjct: 141 EALNEARRMLELVRIPEAQAILGRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALD 200

Query: 487 VSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDP 546
           V++QAQIL L+K LQ E+ + ++FI+HD+ V+  + DRV VM  G+ +E  P EQ+F  P
Sbjct: 201 VTIQAQILQLIKVLQQEMEMGVIFITHDMGVVADIADRVLVMHKGSAVETGPVEQIFHAP 260

Query: 547 QHEYSKKLISLMPEFTGLRES 567
            H Y+K L++ +P    +  S
Sbjct: 261 VHPYTKALLAAVPRLGAMNGS 281