Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

 Score =  397 bits (1021), Expect = e-115
 Identities = 230/556 (41%), Positives = 330/556 (59%), Gaps = 34/556 (6%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLL-SPPG 61
           LLE+++L I + +       V  ++L I+ GE + +VGESG+GKS    +V+ LL SPP 
Sbjct: 6   LLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPPV 65

Query: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121
               G++   GE +   S Q +R+VRG +I  IFQ+PM SLNPL T+E QL E +  +  
Sbjct: 66  VYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHRG 125

Query: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181
           +  + A    +  +++VGI Q   RL  +PHQ SGG RQRV+IA+AL  +PDL+IADEPT
Sbjct: 126 MRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEPT 185

Query: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241
           TALDV++Q QIL+L+ EL ++ N+G + +TH++ +V  + DRVAVM  G  VE   T ++
Sbjct: 186 TALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNRTREL 245

Query: 242 LGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTGP 301
              P+HPYTR L++A P                EA  L+P                    
Sbjct: 246 FSAPQHPYTRQLLNAEPTG--------------EAPPLEPT----------------AST 275

Query: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361
           LL V  + + F  +  L             +SF++  GE+ GLVGESGSGKST    +  
Sbjct: 276 LLDVRELGVSFPIRRGLLRRTVGEKSVLQALSFSLRRGESIGLVGESGSGKSTTGLALLR 335

Query: 362 LYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFH 421
           L + + G + F+G  L    +  +  P+RR++Q+VFQ+P  S+NPR+ +  IIAE +R H
Sbjct: 336 LLR-SRGEIWFDGQPLHRF-NHKQMLPVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVH 393

Query: 422 KLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEP 481
                  +T++++  + E VGL   +  +YP EFSGGQRQRI+IARAL  +P LLI DEP
Sbjct: 394 HPLSPAEQTQRVIQSMQE-VGLDPDSRHRYPSEFSGGQRQRIAIARALILQPELLILDEP 452

Query: 482 TSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQ 541
           TS+LD +VQAQIL LLK LQ    L  LFISHDL V+R +C +V V++ G ++E     Q
Sbjct: 453 TSSLDRTVQAQILTLLKTLQQTHQLAYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQ 512

Query: 542 LFTDPQHEYSKKLISL 557
           LF  PQ +Y+++L+ L
Sbjct: 513 LFEHPQQDYTRQLLQL 528



 Score =  181 bits (459), Expect = 6e-50
 Identities = 108/266 (40%), Positives = 161/266 (60%), Gaps = 15/266 (5%)

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIA-RVI 359
           PLL++ ++++ F        +  +  Q  + VS ++  GET  LVGESGSGKS  A  V+
Sbjct: 5   PLLEIRDLSIAF-------RNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVL 57

Query: 360 AGLYQPNA----GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIA 415
             L  P      G + F G  L     +  R+    ++ M+FQ P  S+NP   I   +A
Sbjct: 58  RLLPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLA 117

Query: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMAG--LKYPHEFSGGQRQRISIARALATRP 473
           E +  H+  R ++   +IV   LE VG+ + A     +PH+ SGG+RQR+ IA AL T+P
Sbjct: 118 EVLSLHRGMRRDAARGEIVG-CLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQP 176

Query: 474 RLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTL 533
            LLI DEPT+ALDV+VQAQIL+LL +L+ ELN+ +LFI+H+L ++R++ DRV VMQ G  
Sbjct: 177 DLLIADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRC 236

Query: 534 LEVAPTEQLFTDPQHEYSKKLISLMP 559
           +E   T +LF+ PQH Y+++L++  P
Sbjct: 237 VEQNRTRELFSAPQHPYTRQLLNAEP 262