Pairwise Alignments
Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23
Score = 408 bits (1048), Expect = e-118
Identities = 230/559 (41%), Positives = 338/559 (60%), Gaps = 22/559 (3%)
Query: 3 LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
LL V+ L + +PS HG +V++L+ + GEI+ +VGESG+GKS ++ L
Sbjct: 9 LLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERAQ 68
Query: 63 IAGGEVYL---NGEK--ISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIH 117
I + L +G + + LS + ++VRG +IGF+ QD + SL+PL + ++ E +
Sbjct: 69 IQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLL 128
Query: 118 ANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIA 177
+ S + R L+ QVGIP P NR QYPH+ SGG+RQR +IA ALA P L+IA
Sbjct: 129 THKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIA 188
Query: 178 DEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGP 237
DEPTTALD ++Q Q+L L L + + G +L+THD+ VVS V D+V VM G LVE G
Sbjct: 189 DEPTTALDATVQQQVLKLFTALAQAGH-GVLLITHDLAVVSQVADQVMVMQNGALVERGA 247
Query: 238 TAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRK 297
+VL P+HPYTR L++A+P + + + A E S L + + +
Sbjct: 248 ARQVLSAPQHPYTRRLLAAIPTAATRGNWL--------AGENPLSQQASTLLSSAGEPGE 299
Query: 298 YTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIAR 357
+G L+V+ V++ F D + A NN+S V GET G+VGESGSGK+T+ +
Sbjct: 300 KSGLALQVDGVSVSFKRPDG------SRMTAVNNISLTVERGETLGIVGESGSGKTTLGK 353
Query: 358 VIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEP 417
VI L P++G + G +AL SE ERRPLR ++Q + Q+P +S +P+ I ++ +P
Sbjct: 354 VILALQPPDSGDILLSGKPWSAL-SERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQP 412
Query: 418 IRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLI 477
+R + ++ ++I+ LLE VGL + P SGGQRQRISIA+ALA P +L+
Sbjct: 413 LRLRRDLSPQARQQRILA-LLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLV 471
Query: 478 CDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVA 537
CDEP SALDV+ QAQ+L+LL LQ L+L+M+FISHDL V++ M R+ VM+ G ++E
Sbjct: 472 CDEPVSALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERG 531
Query: 538 PTEQLFTDPQHEYSKKLIS 556
EQ+F PQH Y+++L+S
Sbjct: 532 TVEQIFNQPQHPYTRQLLS 550
Score = 181 bits (458), Expect = 9e-50
Identities = 97/255 (38%), Positives = 163/255 (63%), Gaps = 8/255 (3%)
Query: 4 LEVKNLRIEYPSRHGVH-AAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
L+V + + + G AV +++L ++RGE +G+VGESG+GK+T+G ++ L PP +
Sbjct: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVIL-ALQPPDS 363
Query: 63 IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122
G++ L+G+ S LS + R +R ++I I QDP++S +P FT+E L + + +
Sbjct: 364 ---GDILLSGKPWSALSERERRPLR-ARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDL 419
Query: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182
S + QR L+L++ VG+ L + P SGG RQR+ IA ALA EP++++ DEP +
Sbjct: 420 SPQARQQRILALLELVGLSP--TLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVS 477
Query: 183 ALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVL 242
ALDV+ Q Q+L+L+ L ++ ++ + ++HD+GVV +++ R+AVM G++VE G ++
Sbjct: 478 ALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIF 537
Query: 243 GTPEHPYTRSLISAV 257
P+HPYTR L+S V
Sbjct: 538 NQPQHPYTRQLLSTV 552
Score = 166 bits (419), Expect = 3e-45
Identities = 111/270 (41%), Positives = 153/270 (56%), Gaps = 20/270 (7%)
Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
PLL+VE +N+ F + ES R N+SF V+ GE LVGESGSGKS AR +
Sbjct: 8 PLLRVEGLNVTFPSPHGPVESVR-------NLSFQVNPGEILALVGESGSGKSVTARTLV 60
Query: 361 GL------YQPNAGR-VTFEG--IDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIF 411
GL Q NA V +G +L L ++ R++ V Q+ S++P +I
Sbjct: 61 GLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIG 120
Query: 412 DIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAG--LKYPHEFSGGQRQRISIARAL 469
+AEP+ HKL S S+ V +LL VG+ A +YPHE SGG RQR IA AL
Sbjct: 121 QEVAEPLLTHKLA-SRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASAL 179
Query: 470 ATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQ 529
A P+LLI DEPT+ALD +VQ Q+L L L + +L I+HDL V+ Q+ D+V VMQ
Sbjct: 180 AAGPKLLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVADQVMVMQ 238
Query: 530 MGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559
G L+E Q+ + PQH Y+++L++ +P
Sbjct: 239 NGALVERGAARQVLSAPQHPYTRRLLAAIP 268