Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  440 bits (1132), Expect = e-128
 Identities = 233/570 (40%), Positives = 350/570 (61%), Gaps = 28/570 (4%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           +LE+ +L + +  R G H A+K ++  + +GE+V VVGESG+GKS     V+ LL+    
Sbjct: 22  VLEIDDLSVSFSGRSGTHLALKGVSFSLNKGEVVAVVGESGSGKSVTSLTVMGLLAASAR 81

Query: 63  IAGGEVYL-----NGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIH 117
           I  G +           +  +   A R +RG  +  IFQ+PMTSLNP+  V  QLTE + 
Sbjct: 82  IERGGIRFIDNAGRRHDLLTMKDDARRRLRGRDMAMIFQEPMTSLNPVLKVGDQLTEALL 141

Query: 118 ANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIA 177
            +    A  A ++A  L+++V I   +  +  YPH  SGGMRQRV+IA ALA +P L+IA
Sbjct: 142 DHQMCDAASAERKARELLRKVRIADIDRVMNSYPHSLSGGMRQRVMIAQALACDPQLLIA 201

Query: 178 DEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGP 237
           DEPTTALDV++Q +IL ++R+L +++N+  + +THDMGVV+ + DRV VMYRG++VE G 
Sbjct: 202 DEPTTALDVTVQARILQILRDLQRQSNMSVLFITHDMGVVAEIADRVVVMYRGEVVEQGT 261

Query: 238 TAKVLGTPEHPYTRSLISAVPRSDRKLD-----RFPLVSYIEEAKELKPLDVKSHWLGQS 292
              +   P+H YT++L++AVPR     D     RFPL+     A E              
Sbjct: 262 VDAIFNRPQHDYTKALLAAVPRLGDMRDSAWPKRFPLLGQQNAAPE-------------- 307

Query: 293 QDH---RKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESG 349
           QDH   R    PLL +  + + +  +  +  S    V A   + F V  GET  +VGESG
Sbjct: 308 QDHTTARYDAPPLLDIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESG 367

Query: 350 SGKSTIARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMK 409
            GKST  R +  L +  +  + F+G ++  L+ + + +PLRR+MQMVFQ+PY S+NPR+ 
Sbjct: 368 CGKSTTGRALLRLVESQSDSLLFDGQEIAGLR-DRDFQPLRRKMQMVFQDPYASLNPRLT 426

Query: 410 IFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARAL 469
           +   IAEP+  H L +S  +    V  LL+ VGL      +YPHEFSGGQRQRI+IARA+
Sbjct: 427 VGFTIAEPLLLHGLAKSLEDATPQVQALLKSVGLLPEHAQRYPHEFSGGQRQRIAIARAM 486

Query: 470 ATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQ 529
           A +P+++I DE  SALDVS+QAQ++NL+ DLQ +  ++ +FISHD+ V+ ++ +RV VM 
Sbjct: 487 ALQPQVIIADEAVSALDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRVAVMY 546

Query: 530 MGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559
           +G ++E+ P + +F +PQH Y+++L++ +P
Sbjct: 547 LGQIVEIGPRQSVFNNPQHPYTRRLLASVP 576



 Score =  200 bits (508), Expect = 2e-55
 Identities = 115/291 (39%), Positives = 179/291 (61%), Gaps = 21/291 (7%)

Query: 3   LLEVKNLRIEYPSRHGVHA-------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVID 55
           LL+++ L++ YP R G+ +       AV+ +   +  GE + +VGESG GKST G A++ 
Sbjct: 320 LLDIRGLKVYYPIRSGILSSVTHRVHAVEQIDFTVWPGETLAIVGESGCGKSTTGRALLR 379

Query: 56  LLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTET 115
           L+          +  +G++I+GL  +  + +R  K+  +FQDP  SLNP  TV   + E 
Sbjct: 380 LVESQSD----SLLFDGQEIAGLRDRDFQPLR-RKMQMVFQDPYASLNPRLTVGFTIAEP 434

Query: 116 IHAN-MQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDL 174
           +  + +  S E+A  +  +L+K VG+  PE+  ++YPH+FSGG RQR+ IA A+A +P +
Sbjct: 435 LLLHGLAKSLEDATPQVQALLKSVGL-LPEHA-QRYPHEFSGGQRQRIAIARAMALQPQV 492

Query: 175 IIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVE 234
           IIADE  +ALDVSIQ Q++NL+ +L +K  V  + ++HDM VV  + +RVAVMY G +VE
Sbjct: 493 IIADEAVSALDVSIQAQVVNLMMDLQQKTGVSWIFISHDMAVVERIANRVAVMYLGQIVE 552

Query: 235 FGPTAKVLGTPEHPYTRSLISAVPRSD------RKLDRFPLVSYIEEAKEL 279
            GP   V   P+HPYTR L+++VP +D      R+LD   + S + +A E+
Sbjct: 553 IGPRQSVFNNPQHPYTRRLLASVPIADPNRRYARELDDSEIPSPLRKANEV 603



 Score =  188 bits (478), Expect = 5e-52
 Identities = 108/279 (38%), Positives = 169/279 (60%), Gaps = 21/279 (7%)

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
           P+L+++++++ F         R     A   VSF++++GE   +VGESGSGKS  +  + 
Sbjct: 21  PVLEIDDLSVSF-------SGRSGTHLALKGVSFSLNKGEVVAVVGESGSGKSVTSLTVM 73

Query: 361 GLYQPNAGRVTFEGI----------DLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKI 410
           GL   +A R+   GI          DL  +K +  RR   R M M+FQ P TS+NP +K+
Sbjct: 74  GLLAASA-RIERGGIRFIDNAGRRHDLLTMKDDARRRLRGRDMAMIFQEPMTSLNPVLKV 132

Query: 411 FDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARA 468
            D + E +  H++  + S  R+   +LL  V +  +  +   YPH  SGG RQR+ IA+A
Sbjct: 133 GDQLTEALLDHQMCDAASAERK-ARELLRKVRIADIDRVMNSYPHSLSGGMRQRVMIAQA 191

Query: 469 LATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVM 528
           LA  P+LLI DEPT+ALDV+VQA+IL +L+DLQ + N+++LFI+HD+ V+ ++ DRV VM
Sbjct: 192 LACDPQLLIADEPTTALDVTVQARILQILRDLQRQSNMSVLFITHDMGVVAEIADRVVVM 251

Query: 529 QMGTLLEVAPTEQLFTDPQHEYSKKLISLMPEFTGLRES 567
             G ++E    + +F  PQH+Y+K L++ +P    +R+S
Sbjct: 252 YRGEVVEQGTVDAIFNRPQHDYTKALLAAVPRLGDMRDS 290