Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  405 bits (1041), Expect = e-117
 Identities = 228/560 (40%), Positives = 342/560 (61%), Gaps = 23/560 (4%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           +LE++++ I Y    G    V+ ++  IQ GE+V +VGESG+GK+T   AVI LL+  G 
Sbjct: 15  VLELEDVAIAYRGDDGERTVVEGVSFAIQPGEVVALVGESGSGKTTTAQAVIGLLADNGR 74

Query: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122
           +  G + LNG  IS  S   +  +RG  +  + QDP +SLNP+ T+  Q+ E +  + + 
Sbjct: 75  LTRGAIRLNGADISRWSQPRLDSIRGRVVSLVPQDPGSSLNPVKTIGEQVDEILRLHQKS 134

Query: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182
                 ++ L+L+ +VG+ +PE R  QYPH+ SGGM+QRV+IAIA+A +P LIIADEPT+
Sbjct: 135 DRHSLRRQTLALLTRVGLTEPELRAGQYPHELSGGMKQRVLIAIAIALKPALIIADEPTS 194

Query: 183 ALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVL 242
           ALDV++Q +IL+L+ EL ++N    + VTHD+GV +   DR+ V  +G + E GPT +VL
Sbjct: 195 ALDVTVQKRILDLLDELRRENGTAILFVTHDLGVAAERADRLLVFQKGYIQEQGPTQQVL 254

Query: 243 GTPEHPYTRSLISAVPR--SDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300
             P+  Y R+L++ +P     R+  R          K +    +    + Q         
Sbjct: 255 SAPQSQYARTLLANIPSLAPARRPSRAAASGQPISCKPIPSQPIPCELIVQ--------- 305

Query: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
               VE +   F    +    R++  +A + VSF+V  G T  +VGESGSGK+T AR+I 
Sbjct: 306 ----VEQLVQEFPPAGN----RKQPFRAVDAVSFSVAPGTTHAIVGESGSGKTTTARMIL 357

Query: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIR- 419
           G  +P AGR+  +G D+T L+ E  R+  R+ +Q+V+QNP++S++P  ++FDI+ EP+R 
Sbjct: 358 GFQRPTAGRILIDGTDITRLRGEALRQ-FRQTIQLVYQNPFSSLDPSQRLFDIVEEPLRN 416

Query: 420 FHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICD 479
           F++  R+E   R  V+++ E V L      + P E SGGQRQR++IARAL   P++L+ D
Sbjct: 417 FNRYARAERANR--VHEIFERVALPASLLQRRPAELSGGQRQRVAIARALVLAPKVLVLD 474

Query: 480 EPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPT 539
           E  SALDV+VQAQIL LL++LQ  L LT LFISHDL V+RQ+ D V V+  G  +E  P 
Sbjct: 475 EAVSALDVTVQAQILRLLEELQASLGLTYLFISHDLAVVRQIADTVSVLYHGKQVESGPV 534

Query: 540 EQLFTDPQHEYSKKLISLMP 559
           EQ+F  P   Y+++LI  +P
Sbjct: 535 EQIFAQPAERYTRELIDAIP 554



 Score =  169 bits (428), Expect = 3e-46
 Identities = 106/279 (37%), Positives = 160/279 (57%), Gaps = 14/279 (5%)

Query: 299 TGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARV 358
           T P+L++E+V + +   D      R  V+    VSFA+  GE   LVGESGSGK+T A+ 
Sbjct: 12  TTPVLELEDVAIAYRGDDG----ERTVVEG---VSFAIQPGEVVALVGESGSGKTTTAQA 64

Query: 359 IAGLYQPNA----GRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDII 414
           + GL   N     G +   G D++            R + +V Q+P +S+NP   I + +
Sbjct: 65  VIGLLADNGRLTRGAIRLNGADISRWSQPRLDSIRGRVVSLVPQDPGSSLNPVKTIGEQV 124

Query: 415 AEPIRFHKLTRSESETRQIVNDLLEHVGLGK--MAGLKYPHEFSGGQRQRISIARALATR 472
            E +R H+ +   S  RQ +  LL  VGL +  +   +YPHE SGG +QR+ IA A+A +
Sbjct: 125 DEILRLHQKSDRHSLRRQTLA-LLTRVGLTEPELRAGQYPHELSGGMKQRVLIAIAIALK 183

Query: 473 PRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGT 532
           P L+I DEPTSALDV+VQ +IL+LL +L+ E    +LF++HDL V  +  DR+ V Q G 
Sbjct: 184 PALIIADEPTSALDVTVQKRILDLLDELRRENGTAILFVTHDLGVAAERADRLLVFQKGY 243

Query: 533 LLEVAPTEQLFTDPQHEYSKKLISLMPEFTGLRESTTAA 571
           + E  PT+Q+ + PQ +Y++ L++ +P     R  + AA
Sbjct: 244 IQEQGPTQQVLSAPQSQYARTLLANIPSLAPARRPSRAA 282