Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  419 bits (1078), Expect = e-121
 Identities = 236/558 (42%), Positives = 350/558 (62%), Gaps = 14/558 (2%)

Query: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62
           LL V++L + Y SR G   AV++L+ DI  GE V +VGESG GKST   A+ +LL P   
Sbjct: 5   LLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLL-PDEA 63

Query: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122
            + GEV  +G  +  L P+A R + G +IG IFQ+PM++LNP++TV  Q+ E +HA+ ++
Sbjct: 64  SSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHERL 123

Query: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182
           S + A  R L L+  V +P+P  R+  YPH+ SGG RQR +IA A+A  P L+IADEPTT
Sbjct: 124 SRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPTT 183

Query: 183 ALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVL 242
           ALD +IQ QIL LI  L +  ++G +L++HD+ +VS  TDRV VM+ G  +E      + 
Sbjct: 184 ALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHLF 243

Query: 243 GTPEHPYTRSLISAVPR----SDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKY 298
              +HPYT+ LI A  R         +R   +     +      +++S  +         
Sbjct: 244 QESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEPRTNAT 303

Query: 299 TGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARV 358
              LL+VE++ +R       ++   +   A + V+F +  GET GLVGESGSGKS++++ 
Sbjct: 304 ADALLEVEDLTVR-------YDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKA 356

Query: 359 IAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPI 418
           ++ L     G++ FEG D+T      + R  R ++QM+FQ+PY+S+NPR  + DI+   +
Sbjct: 357 LSRLIPVAGGQILFEGQDITHAGGA-DLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSVL 415

Query: 419 RFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLIC 478
             HK  R+ ++ +  +++ L+ V L + A  ++PHEFSGGQRQRI+IARAL  RP L+IC
Sbjct: 416 HAHKY-RNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVIC 474

Query: 479 DEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAP 538
           DEP SALDVSVQAQILNLL DL++E  L+ LFISHDL V++ + DR+ VM+ G ++E   
Sbjct: 475 DEPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGN 534

Query: 539 TEQLFTDPQHEYSKKLIS 556
            + L+++P HEY++KLI+
Sbjct: 535 HQNLWSNPSHEYTRKLIA 552



 Score =  183 bits (465), Expect = 1e-50
 Identities = 99/255 (38%), Positives = 156/255 (61%), Gaps = 7/255 (2%)

Query: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61
           +LLEV++L + Y        AV  +T ++ RGE +G+VGESG+GKS++  A+  L+    
Sbjct: 306 ALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALSRLIP--- 362

Query: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121
            +AGG++   G+ I+      +R  RG ++  IFQDP +SLNP  TV   L   +HA+  
Sbjct: 363 -VAGGQILFEGQDITHAGGADLRAFRG-RVQMIFQDPYSSLNPRRTVGDILDSVLHAHKY 420

Query: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181
            ++ +   R    + QV +P+  + ++++PH+FSGG RQR+ IA AL   P L+I DEP 
Sbjct: 421 RNSADRQSRISEALDQVRLPR--SAVERFPHEFSGGQRQRIAIARALIVRPSLVICDEPV 478

Query: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241
           +ALDVS+Q QILNL+ +L ++  +  + ++HD+ VV  ++DR+ VM  G ++E G    +
Sbjct: 479 SALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNHQNL 538

Query: 242 LGTPEHPYTRSLISA 256
              P H YTR LI+A
Sbjct: 539 WSNPSHEYTRKLIAA 553