Pairwise Alignments

Query, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  468 bits (1204), Expect = e-136
 Identities = 249/565 (44%), Positives = 358/565 (63%), Gaps = 19/565 (3%)

Query: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61
           ++L V+NL   +    G    V+ ++ D+  GE V +VGESG+GKS    +++ LL    
Sbjct: 14  AVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRES 73

Query: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121
           +   GE+ L G  +  LS  AMR VRG+++  IFQ+PMTSLNPLFT+  Q++E +  +  
Sbjct: 74  SRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQP 133

Query: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181
           +S  EA    + L+++V IP   +R  +YPH+FSGGMRQRV+IA+ALA +P L+IADEPT
Sbjct: 134 MSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEPT 193

Query: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241
           TALDV+IQ QIL+LI+ L ++     + +THDMGVV+ + DR  VMYRG+ VE G TA +
Sbjct: 194 TALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATADI 253

Query: 242 LGTPEHPYTRSLISAVP-----RSDRKLDRFPLVSYI--EEAKELKPLDVKSHWLGQSQD 294
               +HPYTR+L+SAVP     + + +  RFP+V+    E  + ++P D           
Sbjct: 254 FHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTVD-------- 305

Query: 295 HRKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKST 354
                 P+LKVE +  RF     L       V A  NVSF +  GET  LVGESG GKST
Sbjct: 306 --ASAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKST 363

Query: 355 IARVIAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDII 414
             R I  L +P+AG V   G ++  L  +   R +R+ +QM+FQ+P+ S+NPRM +   I
Sbjct: 364 TGRAIMRLIEPDAGSVVVNGENILTL-DKSGMREMRKTVQMIFQDPFASLNPRMTVGAAI 422

Query: 415 AEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPR 474
           AEP   H++  S  E +++V D+L  VGL      +YPHEFSGGQRQRI IARALA +P+
Sbjct: 423 AEPFLEHRM-GSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPK 481

Query: 475 LLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLL 534
           +++ DE  SALDVS++AQ++NL+ DLQ  L+L  LFISHD+ V+ ++  RV VM +G ++
Sbjct: 482 VIVADESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIV 541

Query: 535 EVAPTEQLFTDPQHEYSKKLISLMP 559
           E+ P   +F +PQH+Y++KL++ +P
Sbjct: 542 EIGPRADVFDNPQHDYTRKLMAAVP 566



 Score =  196 bits (498), Expect = 2e-54
 Identities = 106/240 (44%), Positives = 153/240 (63%), Gaps = 7/240 (2%)

Query: 22  AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGTIAGGEVYLNGEKISGLSPQ 81
           AV++++ D++ GE + +VGESG GKST G A++ L+ P      G V +NGE I  L   
Sbjct: 337 AVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLIEPDA----GSVVVNGENILTLDKS 392

Query: 82  AMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQVSAEEAYQRALSLMKQVGIP 141
            MRE+R + +  IFQDP  SLNP  TV   + E    +   SA EA +    ++ +VG+ 
Sbjct: 393 GMREMRKT-VQMIFQDPFASLNPRMTVGAAIAEPFLEHRMGSAREAKEVVADMLNKVGLS 451

Query: 142 QPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELCK 201
              +   +YPH+FSGG RQR+ IA ALA +P +I+ADE  +ALDVSI+ Q++NL+ +L +
Sbjct: 452 P--DMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVSIKAQVINLMLDLQQ 509

Query: 202 KNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVPRSD 261
             ++  + ++HDM VV  V+ RVAVMY G++VE GP A V   P+H YTR L++AVP  D
Sbjct: 510 SLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDNPQHDYTRKLMAAVPVPD 569