Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 737 a.a., DNA helicase from Rhodanobacter sp. FW510-T8

 Score =  391 bits (1005), Expect = e-113
 Identities = 262/649 (40%), Positives = 358/649 (55%), Gaps = 24/649 (3%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LN  Q EAV    G  LVLAGAGSGKTRV+T++I +L Q        I AVTFTNKAA E
Sbjct: 13  LNDAQREAVCAPPGHYLVLAGAGSGKTRVLTHRIGWLTQVEHVPPWAILAVTFTNKAAGE 72

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M+ R+ + L  G ++GL V TFH +   ++RR ++  GL  GF + D  DQ  L+K +  
Sbjct: 73  MRARL-ENLIPGGTQGLTVGTFHGIAHRLLRRHWREAGLPEGFQILDADDQQRLVKRVVA 131

Query: 123 KQ-LDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
              LD  K   R    TI+ WK++   P   +          F   ++ Y+   +    +
Sbjct: 132 GLGLDEAKFPPRQAAWTINGWKDEGKRPDAIEHRDHPVTHT-FVRIYQAYEDACRRAGLV 190

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVG 241
           DF +L+L    L      V + +Q R R+LL+DE+QDTNT QY  +++L G  G++  VG
Sbjct: 191 DFAELLLRAHELWLKQPAVLEHYQQRWRHLLIDEFQDTNTLQYAWIRVLAGATGKVFAVG 250

Query: 242 DDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKA 301
           DDDQSIY WRGA+ +N+    +DFP  + IKLEQNYRSTS IL+AAN +I  N     K 
Sbjct: 251 DDDQSIYGWRGARVENMQQFLKDFPGARTIKLEQNYRSTSTILKAANSVIQRNGSRLGKQ 310

Query: 302 LFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEKS 361
           L++   EGE++ +  A NE  EA R + E I          +D AILYR N QSR  E+ 
Sbjct: 311 LWTAGEEGERIALYAAYNEQDEA-RFVVERIREYIAEHGSAKDCAILYRSNAQSRNFEEQ 369

Query: 362 LTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKL 421
           L Q  + Y++ GG  FF RAE+KD +AYLR+  N  DD AF R VNTP R IG  TL+ L
Sbjct: 370 LAQRSIGYRVYGGQRFFERAEVKDALAYLRLTANRHDDAAFERAVNTPPRGIGDRTLDVL 429

Query: 422 GSYANMRGKSLFTASF-ELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNT-------- 472
              A     S++ A+  ELG    L+GR    ++ F   + A+A +A R +T        
Sbjct: 430 RRRARSENSSMWEAALSELGGGSELAGRAKNAVKAFLGMIDAMA-HAFRPSTPHGEKHAL 488

Query: 473 --VEAVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLK 530
              E +   +      D+ YE       AE R++N+ +L +  VA      P+  +  L 
Sbjct: 489 TLAEQIDHAITHTGLRDF-YEKDGRGN-AESRVENLDELVN--VASRFERTPEDVDAGLD 544

Query: 531 EVVQRLTLRDMMERGEENDDS--DAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSI-D 587
           E+   L+    +E GE   ++  D VQLMTLH++KGLEFP V+L+G EEG+ P Q S+ D
Sbjct: 545 ELAAFLS-HAALEAGEGQGEAWDDCVQLMTLHSAKGLEFPLVFLVGMEEGLFPSQRSVED 603

Query: 588 EENVEEERRLMYVGITRAQRELTFIVCKERRQFGELIKPSQSRFLDELP 636
           E  +EEERRL YVGITRA+  L     + RR  G  +    SRFL E+P
Sbjct: 604 EGRLEEERRLAYVGITRARARLVVSYAESRRMHGTEMLARPSRFLAEIP 652