Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 660 a.a., UvrD-helicase domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  564 bits (1454), Expect = e-165
 Identities = 305/668 (45%), Positives = 430/668 (64%), Gaps = 15/668 (2%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LNP+Q  AV++   P LVLAGAGSGKT VIT KIAYL+Q+    A  IAA+TFTNKAARE
Sbjct: 2   LNPQQLAAVEHCDTPLLVLAGAGSGKTSVITQKIAYLIQRRKLAASKIAAITFTNKAARE 61

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M+ERVA+ +   ++  L VSTFH LGL  ++ E    GL+ GFS+ D  D   ++KEL  
Sbjct: 62  MRERVAKLISSEDAAALTVSTFHALGLKFLQIEHARAGLRRGFSVLDADDSEGIVKELAP 121

Query: 123 KQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNALD 182
           K      D+L  L + +S  KN  L+P +A A A+  ++L  A  +ELYQ ++ ++NA+D
Sbjct: 122 K--GAKPDVLFGLRNLLSRAKNGGLSPEEALAAARSPRELEAATIYELYQARLATFNAVD 179

Query: 183 FDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVGD 242
           FDDLI LP+ +L S++E R  W+ R+RYLLVDEYQDTN +QY L+K+L GERG +T VGD
Sbjct: 180 FDDLIRLPLRILESDDECRDAWRERLRYLLVDEYQDTNDAQYRLLKVLAGERGHITCVGD 239

Query: 243 DDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKAL 302
           DDQSIY+WRGA P+N+  LG D+P+L++IKLEQNYR   RILRAAN LIA+NPH ++K L
Sbjct: 240 DDQSIYAWRGANPENIDQLGRDWPNLRVIKLEQNYRCGRRILRAANALIAHNPHSHEKKL 299

Query: 303 FSELAEGEKLKVILANNEDHEAERV--IAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
           +SE  EG  ++V+     +HEAE++  IA  +A K  ++  + D AILYRGN Q+R++EK
Sbjct: 300 WSEHPEGAPIRVLECKEAEHEAEKIASIATTLAEK--HKARWDDMAILYRGNFQARVLEK 357

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
           +L   R+PY L+G  SF  RAE+KD++ YLR+L NP DD AFLR+VN PKREIG  TLEK
Sbjct: 358 ALRLARIPYHLTGALSFLDRAEVKDLLCYLRLLTNPSDDAAFLRVVNVPKREIGATTLEK 417

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG  A  R  SL  A+   G+ + L+ R    L  F   L  +   +   +  + V  ++
Sbjct: 418 LGQLAQSRHSSLLDATRSDGVLRQLTPRPAAALASFANLLDELRSASLHQSAADLVELIL 477

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
           +   Y   +   +      E ++ N+ +L  W  A  +G N      +  ++  +L L  
Sbjct: 478 KRTGYAAQIAAGTTDATVRERKLGNLKELADWFRAMQKGGN------SAGDLAAQLAL-- 529

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
            +   + ++  +AV++MTLHA+KGLEF +V++ G E+G LPH+ ++DE  V+EERRLMYV
Sbjct: 530 -LSHADRDEPGNAVRMMTLHAAKGLEFRFVFIAGCEDGTLPHEGALDEGRVDEERRLMYV 588

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRA+  LT     + +++GE+     SRFL ELPQ D+ W+ K     +E      ++
Sbjct: 589 GITRAKELLTLSWSAKTKRYGEVHNNQPSRFLHELPQADLHWQGKDPEADKEVTRETAES 648

Query: 661 HIANLRAM 668
           H+A ++AM
Sbjct: 649 HMARIKAM 656