Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., UvrD-helicase domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  377 bits (967), Expect = e-108
 Identities = 264/690 (38%), Positives = 357/690 (51%), Gaps = 59/690 (8%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LN  Q EAV    G  LVLAGAGSGKTRV+T++I +L Q        I AVTFTNKAA E
Sbjct: 10  LNAAQREAVCAPPGHYLVLAGAGSGKTRVLTHRIGWLTQAERVPPWAILAVTFTNKAAGE 69

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKE-LT 121
           M+ R+ + L  G ++GL V TFH +   ++RR ++  GL   F + D  DQL L+K  + 
Sbjct: 70  MRARL-EALIPGGTQGLTVGTFHGIAHRLLRRHWREAGLPEAFQILDADDQLRLVKRVIA 128

Query: 122 EKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
              LD  K   R     I+NWK++   P   +       Q  F   ++ Y+   +    +
Sbjct: 129 GLGLDDAKFPPRQACWQINNWKDEGKRPDAIEHREHPVTQT-FVRIYQAYEDACRRAGLV 187

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVG 241
           DF +L+L    L   N  V   +Q R RYLLVDE+QDTNT QY  +++L G  G++ VVG
Sbjct: 188 DFAELLLRAHELWLKNPAVLAHYQQRWRYLLVDEFQDTNTLQYAWIRVLAGNTGQVFVVG 247

Query: 242 DDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKA 301
           DDDQ+IY WRGAK +N+     DFP  + IKLEQNYRSTS IL+AAN +I  N     K 
Sbjct: 248 DDDQAIYGWRGAKVENVQQFLRDFPGARTIKLEQNYRSTSTILKAANSVIQRNGSRLGKQ 307

Query: 302 LFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEKS 361
           L++   +G+++ +  A NE  EA R + E I      +   +D AILYR N QSR  E+ 
Sbjct: 308 LWTAGEDGQRIALYAAYNEQDEA-RFVVERIREYIDEQGSAKDCAILYRSNAQSRNFEEQ 366

Query: 362 LTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKL 421
           L Q  + Y++ GG  FF RAE+KD +AYLR+  N  DD AF R VNTP R IG  TL+ L
Sbjct: 367 LAQRNIGYRVYGGQRFFERAEVKDALAYLRLTANRHDDAAFERAVNTPPRGIGERTLDAL 426

Query: 422 GSYANMRGKSLFTASF-ELGLEQHLSGRGLENLRRFTEWLVAIAD--------------- 465
              A     SL+ A+  EL     L+GR    ++ F   +  +A                
Sbjct: 427 RRRARAEDTSLWEAALAELAGGNELAGRAKNAVKGFLALIDQMAHAFRPLSLRRPSGSPL 486

Query: 466 NAERG-------------------------------NTVEAVRALVRDIRYEDWLYETSA 494
             ERG                                  E +   +      D+ YE  +
Sbjct: 487 AGERGWGEGTGSPEGSAPPVPSPPAPLPEGEGSQGLTLAEQIDHAITHTGLRDF-YEKDS 545

Query: 495 SPKAAEMRMKNVSDLYSWIVADLE--GDNPDQQEKTLKEVVQRLTLRDMMERGEENDDSD 552
              A E R++N+ +L + + +  E   ++ D     L   +   TL     +GE  D  D
Sbjct: 546 RGNA-ESRVENLDELVN-VASRFERTAEDIDAGLSELSAFLSHATLEAGENQGEAWD--D 601

Query: 553 AVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSI-DEENVEEERRLMYVGITRAQRELTF 611
            VQLMTLH++KGLEFP V+L+G EEG+ P Q S  DE  +EEERRL YVGITRA+  L  
Sbjct: 602 CVQLMTLHSAKGLEFPLVFLVGMEEGLFPSQRSTEDEGRLEEERRLAYVGITRARERLVV 661

Query: 612 IVCKERRQFGELIKPSQSRFLDELPQDDIE 641
              + RR  G  +    SRFL E+P + I+
Sbjct: 662 THAESRRMHGTEMLARPSRFLGEMPAELID 691