Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., ATP-dependent DNA helicase Rep from Pseudomonas simiae WCS417

 Score =  723 bits (1866), Expect = 0.0
 Identities = 363/671 (54%), Positives = 490/671 (73%), Gaps = 5/671 (0%)

Query: 2   KLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAAR 61
           +LNPRQ EAV YV GP LVLAGAGSGKT VIT KIA+L+QQCG +A+ I A+TFTNKAAR
Sbjct: 3   RLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAHLIQQCGIRAQYIVAMTFTNKAAR 62

Query: 62  EMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELT 121
           EMKERV   L  GE RGL V TFH LGLNIIR+E   LG K GFS+FD+ D  +L+ ++ 
Sbjct: 63  EMKERVGTLLKGGEGRGLTVCTFHNLGLNIIRKEHARLGYKPGFSIFDETDVKSLMTDIM 122

Query: 122 EKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
           +K+  GD D +  + + I  WKND++ P QA   A+  ++   A  +  YQ+ ++++NA+
Sbjct: 123 QKEYAGD-DGVDEIKNMIGAWKNDLILPAQALENARNPKEQTAAIVYTHYQRTLKAFNAV 181

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVG 241
           DFDDLILLPV L   + ++ ++WQN++RYLLVDEYQDTN SQY LVK+L+G+R + TVVG
Sbjct: 182 DFDDLILLPVKLFEEHADILEKWQNKVRYLLVDEYQDTNASQYLLVKMLIGKRNQFTVVG 241

Query: 242 DDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKA 301
           DDDQSIY+WRGA+P+NL+LL +D+PSLK++ LEQNYRSTSRILR AN+LI+NNPH ++K 
Sbjct: 242 DDDQSIYAWRGARPENLMLLKDDYPSLKVVMLEQNYRSTSRILRCANVLISNNPHEFEKQ 301

Query: 302 LFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEKS 361
           L+SE+  G++++VI   NED EAERV  EI++        Y D+AILYRGN+Q++LIE  
Sbjct: 302 LWSEMGHGDEIRVIRCRNEDAEAERVAVEILSLHLRTDRPYSDFAILYRGNYQAKLIELK 361

Query: 362 LTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKL 421
           L  ++VPY+LSGG SFF R E+KD+MAY R++VNPDDDNAFLR++N P+REIG  TLEKL
Sbjct: 362 LQHHQVPYRLSGGNSFFGRQEVKDLMAYFRLIVNPDDDNAFLRVINVPRREIGSTTLEKL 421

Query: 422 GSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALVR 481
           G+YA  R  S++ A+ E+GL +HL  R  + L RF  ++  + +     + + A+R++V 
Sbjct: 422 GNYATERKISMYAATDEIGLGEHLDSRFTDRLARFKRFMDKVREQCAGEDPISALRSMVM 481

Query: 482 DIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRDM 541
           DI YE+WL   S+S KAA+ RM NV  L   +   LE D  +  E T+++ + +L LRDM
Sbjct: 482 DIDYENWLRTNSSSDKAADYRMSNVWFLIEALKNTLEKD--EDGEMTVEDAIGKLVLRDM 539

Query: 542 MER-GEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           +ER  EE D ++ VQ+MTLHASKGLEFPYV+++G EE ILPH++SI+ + +EEERRL YV
Sbjct: 540 LERQQEEEDGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSIEADTIEEERRLAYV 599

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRA++ L F    +R+Q+GE+I  + SRFLDELP DD+ WE      T E +  +G  
Sbjct: 600 GITRARQTLAFTFAAKRKQYGEIIDCAPSRFLDELPPDDLAWEGNDDTPT-EVKAVRGNT 658

Query: 661 HIANLRAMFKK 671
            +A++RAM K+
Sbjct: 659 ALADIRAMLKR 669