Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 810 a.a., UvrD-helicase domain-containing protein from Variovorax sp. OAS795

 Score =  372 bits (955), Expect = e-107
 Identities = 256/691 (37%), Positives = 376/691 (54%), Gaps = 61/691 (8%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LNP Q  AV   +G  L+LAGAGSGKTRV+T +IA+L+Q     A  I AVTFTNKAA+E
Sbjct: 27  LNPEQRTAVTLPAGNALILAGAGSGKTRVLTTRIAWLLQTGQVSAGGILAVTFTNKAAKE 86

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M  R+   L     RG+ + TFH L   ++R  +K   L + F + D QDQL+ +K L +
Sbjct: 87  MMTRLTAMLPVNV-RGMWIGTFHGLCNRLLRAHWKLANLPSTFQILDTQDQLSAIKRLMK 145

Query: 123 K-QLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
           +  +D ++   +     I+  K D L P   +   + +++ +    ++LY++Q Q    +
Sbjct: 146 QFNVDDERFPAKQTQWFIAGAKEDGLRPKDVEIRTEDDRKKV--ELYQLYEEQCQREGVV 203

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGER--GRLT- 238
           DF +L+L    LLR N+ VR+ +Q R R++L+DE+QDTN  QY  +K+L G    G+ T 
Sbjct: 204 DFGELMLRSYELLRDNDPVREHYQRRFRHILIDEFQDTNRLQYAWIKMLSGTTAAGQFTP 263

Query: 239 ------VVGDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIA 292
                  VGDDDQSIY++RGA+  N+     +F     IKLEQNYRS S IL +AN LI+
Sbjct: 264 GQNSVIAVGDDDQSIYAFRGARVGNMADFVREFDVQHQIKLEQNYRSYSNILDSANELIS 323

Query: 293 NNPHVYQKALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGN 352
           +N     K L ++   GE ++V  +  +  EA+ ++ E+      +  + ++ A+LYR N
Sbjct: 324 HNKKRLGKNLRTDQGPGEPVRVYESPTDLAEAQWMVEEM-RQLVRDGFDRKEMAVLYRSN 382

Query: 353 HQSRLIEKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKRE 412
            QSR+IE +L    VPY++ GG  FF RAEIK  +AYLR+L N DDD +FLR+VN P R 
Sbjct: 383 AQSRVIETALFNASVPYRVYGGLRFFERAEIKHALAYLRLLENKDDDTSFLRVVNFPPRG 442

Query: 413 IGPATLEKLGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNT 472
           IG  TLE+L   A   G+SL  A   +G      G+   NL  F   +  + +  + G +
Sbjct: 443 IGARTLEQLQDAARTAGRSLHDAVHAVG------GKAGSNLTAFVAKIDVLREQTQ-GAS 495

Query: 473 VEAVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADL--EGDNPDQQEKTLK 530
           +  +  LV D      L E   + +    R++N+ +L +   + +  EG   D     + 
Sbjct: 496 LREIIELVLD---HSGLVEHYKADREGADRIENLEELVNAAESFVTQEGFGRDAVALPID 552

Query: 531 EVVQRLT--------------LRDMMERGE--------------ENDDS------DAVQL 556
           E+ Q L               L    E GE              E+ D+      DAVQL
Sbjct: 553 ELRQSLASQGIDPNRPLMDEPLAPDAETGETLSPLAAFLTHAALESGDNQAQAGQDAVQL 612

Query: 557 MTLHASKGLEFPYVYLIGAEEGILPHQTSI-DEENVEEERRLMYVGITRAQRELTFIVCK 615
           MT+HA+KGLEF  V++ G EEG+ PH+ S+ D E++EEERRLMYV ITRA++ L     +
Sbjct: 613 MTVHAAKGLEFDCVFITGMEEGLFPHENSMSDFESLEEERRLMYVAITRARKRLYLSHSQ 672

Query: 616 ERRQFGELIKPSQSRFLDELPQDDIEWEVKK 646
            R   G+     +SRF +ELP+  ++W   K
Sbjct: 673 TRMLHGQTRYNVKSRFFEELPEGALKWLTPK 703