Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 745 a.a., ATP-dependent DNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  401 bits (1031), Expect = e-116
 Identities = 234/642 (36%), Positives = 377/642 (58%), Gaps = 19/642 (2%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LN  Q  AV + +GP +++AGAGSGKTRV+T +IA+L+ Q G    NI A+TFTNKAA+E
Sbjct: 7   LNESQRAAVLHTNGPAMIIAGAGSGKTRVLTYRIAHLISQ-GVDPFNILALTFTNKAAKE 65

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M+ R+ + +G  E++ + + TFH++   I+R E   +G    F+++D  D   L++ +  
Sbjct: 66  MRHRIEKVIGN-EAKNIWMGTFHSVFSRILRAEADKIGYPKSFTIYDSDDSKTLIRNIV- 123

Query: 123 KQLDGDKDLLR--LLLSTISNWKNDMLT------PPQAKAMAKGEQQLLFAHCFELYQKQ 174
           K+++ D  L +  ++L  IS+ KN +++       P  +A  +   +      +E+YQ +
Sbjct: 124 KEMNLDDKLYKPNVVLGRISSAKNKLISVKQYINDPVIQADDEAAMRPKIGKIYEMYQSR 183

Query: 175 MQSYNALDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGER 234
                A+DFDDL+    +L + + +   ++Q+   Y++VDEYQDTN SQY + + L  + 
Sbjct: 184 CFRAGAMDFDDLLFNTNVLFKDHPDALNKYQHIFHYVMVDEYQDTNYSQYLITRKLAAKN 243

Query: 235 GRLTVVGDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANN 294
             + VVGDD QSIY++RGA  QN++    D+P L++ KLEQNYRST  I+ AAN +I +N
Sbjct: 244 QNIVVVGDDAQSIYAFRGADIQNILNFERDYPELQVFKLEQNYRSTKNIVHAANSVIKHN 303

Query: 295 PHVYQKALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQ 354
               +K +F++  +G  ++VI AN+++ E + V   I   K  N   Y D+AILYR N Q
Sbjct: 304 QAQLRKEVFTDNEQGPLIEVIKANSDNEEGKLVATTIFEEKMSNHLSYDDFAILYRTNAQ 363

Query: 355 SRLIEKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIG 414
           SR +E++L +  + YK+ GG SF+ R EIKD++AYLR+ VNP+D+ A  R++N PKR IG
Sbjct: 364 SRAMEEALRRMNIKYKIIGGLSFYQRKEIKDLIAYLRLTVNPNDEQALRRVINYPKRGIG 423

Query: 415 PATLEKLGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVE 474
             T +KL   AN    S++      G  Q L  R    +  F+  +   A  A+  +  +
Sbjct: 424 ETTEQKLFVTANETNHSVWEVVQNAG--QFLGNRVGTAIENFSIMIKDFARIAQNSDAFD 481

Query: 475 AVRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQ 534
             + + +     D L++       A  R +N+ +L + I   +  D+P++ +K+L   +Q
Sbjct: 482 VAKHIAKHSGIVDELHQDKTVEGLA--RYENIQELLNGIKEYV--DDPEKDDKSLDAFLQ 537

Query: 535 RLTLRDMMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEE-NVEE 593
            + L    +  + +DD + V LMT+H++KGLEF  V+++G EE + P Q  ++   ++EE
Sbjct: 538 DIALITDADT-KADDDGEFVTLMTIHSAKGLEFKNVFIVGMEENLFPSQMMLNSRADLEE 596

Query: 594 ERRLMYVGITRAQRELTFIVCKERRQFGELIKPSQSRFLDEL 635
           ERRL YV ITRA+++L       R Q+G L    +SRFLDE+
Sbjct: 597 ERRLFYVAITRAEKKLYLTYATSRYQWGNLRACEKSRFLDEI 638