Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., ATP-dependent DNA helicase Rep from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  536 bits (1382), Expect = e-157
 Identities = 313/669 (46%), Positives = 423/669 (63%), Gaps = 32/669 (4%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LN  Q EAV +++GPCLVLAGAGSGKTRVIT+KI  L+Q  G  A  IAA+TFTNKAA E
Sbjct: 5   LNIAQLEAVNHLAGPCLVLAGAGSGKTRVITHKIGRLIQ-AGLAADRIAAITFTNKAAAE 63

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELTE 122
           M+ER AQ +G+ ++R +++ TFH LG+ ++R + + LGLK  FS+ D  D  ++LK+   
Sbjct: 64  MRERAAQLVGR-DARKVLICTFHALGVRLLRDDGEVLGLKKQFSILDTDDITSMLKDCGG 122

Query: 123 KQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNALD 182
                D    R     IS WK   +   Q  A AK E + + A     Y++++ +Y ++D
Sbjct: 123 TT---DTATARGWQWAISAWKGAGMNAAQCLAQAKDEDERVTATIMARYEERLVAYQSVD 179

Query: 183 FDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVGD 242
           FDDLI LP+ LLR +E+VR RWQ ++ ++LVDEYQDTN +QYEL+KLLVGERGR T VGD
Sbjct: 180 FDDLITLPLKLLREHEDVRARWQKKMGHVLVDEYQDTNATQYELLKLLVGERGRFTAVGD 239

Query: 243 DDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKAL 302
           DDQSIY WRGA   NL  L +D+P LK+IKLEQNYRSTS ILRAAN +I  NP ++ K L
Sbjct: 240 DDQSIYGWRGATLDNLKKLPQDYPELKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKTL 299

Query: 303 FSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNR-TEYRDYAILYRGNHQSRLIEKS 361
           +S+L EGE ++V+ A+NE+HEAER +A I++ +  ++  E+RD+AILYR NH +R  E+S
Sbjct: 300 WSDLGEGEPVRVVDADNEEHEAERAVARILSLRASSQHKEWRDFAILYRANHMARPFEQS 359

Query: 362 LTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEKL 421
           L + +VPYK+SGG SFF +AEI+D+ A+LR+LVN +DD AFLR   TPKR IG  TL++L
Sbjct: 360 LRRAQVPYKVSGGQSFFDKAEIRDLCAWLRLLVNNNDDPAFLRSATTPKRGIGHTTLQQL 419

Query: 422 GSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRAL-- 479
           G++A     SLF A F   L   L  R +  L  F   +  +   A      EA RA   
Sbjct: 420 GAFATQYKLSLFEALFANSLGTALPPRAVATLHEFGRAVNDLEYRARHTLGHEAARAFLT 479

Query: 480 --VRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWI-------VADLEGDNPDQQEKTLK 530
             ++DI YE  LY++  + K A  R  NV D   W+       + + +G   + + K+L 
Sbjct: 480 EWLKDIDYEKHLYDSEDNEKVAAARWTNVMDFCDWVAGRCGGKLEEEDGVKIETERKSLL 539

Query: 531 EVVQRLTLRDMMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPH-------- 582
           EVVQ + L   +   E   D + V L TLHASKGLE+P+V L+G  EG+LP         
Sbjct: 540 EVVQTIALLSTL--SEREQDQNVVTLSTLHASKGLEWPHVMLVGVNEGLLPFKMEEEPGQ 597

Query: 583 ---QTSIDEENVEEERRLMYVGITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDD 639
              Q +   + ++EERRLMYVGITRAQR L     K R++  E I    SRF+ E+  D 
Sbjct: 598 SDAQAADMAQRLQEERRLMYVGITRAQRTLAVSWLKRRKKGRESIPGLASRFIKEMALD- 656

Query: 640 IEWEVKKKP 648
            +  VK+ P
Sbjct: 657 -QATVKEDP 664