Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., ATP-dependent DNA helicase Rep from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  973 bits (2516), Expect = 0.0
 Identities = 481/668 (72%), Positives = 571/668 (85%), Gaps = 2/668 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           M+LNP Q  AV++V+GPCLVLAGAGSGKTRVITNKIA+L++ CGY+AR+IAAVTFTNKAA
Sbjct: 1   MRLNPGQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERV QTLG+ E+RGLM+STFHTLGL+II+RE+ ALG+K+ FSLFDD DQ+ALLKEL
Sbjct: 61  REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQVALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TE  ++ DK LL+ L+STISNWKND+ TP QA A AKGE+  +FAHC+ LY   M++ N 
Sbjct: 121 TEGLIEDDKVLLQQLISTISNWKNDLKTPAQAAAGAKGERDRIFAHCYGLYDAHMKACNV 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LLL+ N+EVR+RWQN+IRYLLVDEYQDTNTSQYELVKLLVG+R R TVV
Sbjct: 181 LDFDDLILLPTLLLQRNDEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGQRARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGA+PQNLVLL +DFP+L++IKLEQNYRS+ RIL+AANILIANNPHV++K
Sbjct: 241 GDDDQSIYSWRGARPQNLVLLSQDFPALQVIKLEQNYRSSGRILKAANILIANNPHVFEK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
            LFSEL  G +LKV+ ANNE+HEAERV  E+IAH F+N+T+Y+DYAILYRGNHQSR+ EK
Sbjct: 301 RLFSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEK 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
            L QNR+PYK+SGGTSFF+R EIKD++AYLRVL NPDDD+AFLRIVNTPKREIGPATL+K
Sbjct: 361 FLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQK 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG +A  R KSLFTASF++GL Q L+GRG ++L RFT WL  I   AER   V AVR L+
Sbjct: 421 LGEWAMTRNKSLFTASFDMGLSQKLTGRGYDSLTRFTHWLGEIQRLAER-EPVAAVRDLI 479

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
             I YE WLYETS SPKAAEMRMKNV+ L+SW+   LEG+  D +  TL +VV R TLRD
Sbjct: 480 HGIDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGNELD-EPMTLTQVVTRFTLRD 538

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMERGE  ++ D VQLMTLHASKGLEFPYVY++G EEG LPHQ+SIDE+N+EEERRL YV
Sbjct: 539 MMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIEEERRLAYV 598

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRAQ+ELTF +CKERRQ+GEL++P  SRFL ELPQDD+ WE ++K V+ EERM KGQ+
Sbjct: 599 GITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQS 658

Query: 661 HIANLRAM 668
           H+ANL+AM
Sbjct: 659 HLANLKAM 666