Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., ATP-dependent DNA helicase Rep (EC 3.6.1.-) from Kangiella aquimarina DSM 16071

 Score =  790 bits (2041), Expect = 0.0
 Identities = 391/670 (58%), Positives = 512/670 (76%), Gaps = 4/670 (0%)

Query: 2   KLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAAR 61
           +LN +Q EA+    GP LVLAGAGSGKT VIT K+ YL+++    ARNI AVTFTNKAAR
Sbjct: 19  QLNEKQREALLATQGPLLVLAGAGSGKTSVITRKMVYLIKEKQIPARNIVAVTFTNKAAR 78

Query: 62  EMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELT 121
           EMK+RV++  G   ++GL VSTFH  GLN IRRE+K LG+K+ F++FDDQD LALLK+L 
Sbjct: 79  EMKQRVSKLAGSNATQGLTVSTFHNFGLNFIRREYKKLGMKSNFTIFDDQDTLALLKDLG 138

Query: 122 EKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNAL 181
            K+ + DK LL  L   IS WKND++ P QA    K ++QL+F+  +E Y + M++YNA+
Sbjct: 139 FKEAESDKQLLFRLQQQISAWKNDLILPEQAINQVKDQEQLIFSKVYEKYARSMKAYNAV 198

Query: 182 DFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVG 241
           DFDDLIL+P LLLR + EVR++WQN+IRYLLVDEYQDTNTSQYEL+K LVG+ G  TVVG
Sbjct: 199 DFDDLILIPTLLLRDDPEVREKWQNKIRYLLVDEYQDTNTSQYELIKHLVGQFGSFTVVG 258

Query: 242 DDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKA 301
           DDDQSIYSWRGA+P+NL  L +D+P+L++IKLEQNYRS  RIL+AAN+LI NNPHV++K 
Sbjct: 259 DDDQSIYSWRGARPENLDQLAKDYPNLQVIKLEQNYRSYGRILKAANVLIDNNPHVFEKK 318

Query: 302 LFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRT-EYRDYAILYRGNHQSRLIEK 360
           L+S+   G+ LKV+   NED EAE+V+ EII+ K   +   Y D+AILYRGNHQ+++ E+
Sbjct: 319 LWSDKPYGDPLKVVTCPNEDAEAEKVVTEIISRKVRTKNGRYSDFAILYRGNHQAKIFER 378

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
           +L  N VPYK+SG TSFF+RAEIKDIMAYLR+L NPDDDNAFLRI NTP+R IGP TLE+
Sbjct: 379 TLIANNVPYKISGSTSFFSRAEIKDIMAYLRLLTNPDDDNAFLRIANTPRRGIGPTTLEQ 438

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LGSYANMR  SLF A+ E+GLEQHL G+GLEN+RRF + +   ADNAERG++V  +  LV
Sbjct: 439 LGSYANMRHISLFAATQEIGLEQHLQGKGLENIRRFADLISRAADNAERGDSVGVIHDLV 498

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
             I Y  WL+ETS++PKAAE R  N+ +L  W+   +  D+ +         V  L LRD
Sbjct: 499 ARIGYHSWLHETSSTPKAAEYRWNNIQELLGWVEKGI--DDNEHDPNPFAAAVANLMLRD 556

Query: 541 MMERGE-ENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMY 599
           M++R E E ++S+ VQLMTLHA+KGLEF +VYL+G EE  LPH++SI+ +++EEERRL Y
Sbjct: 557 MLDRNEKEEEESNEVQLMTLHAAKGLEFNHVYLVGMEEEFLPHKSSIENDDIEEERRLAY 616

Query: 600 VGITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQ 659
           VGITRAQ+ LTF +CK+R ++GE++    SRFL+ELPQDD++W+ K+KP+++EE+     
Sbjct: 617 VGITRAQQTLTFTLCKKRSKYGEVMACEPSRFLEELPQDDLDWDAKRKPLSEEEQEQLAT 676

Query: 660 AHIANLRAMF 669
            +I+ L+++F
Sbjct: 677 DNISMLKSLF 686