Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., DNA helicase Rep from Erwinia tracheiphila SCR3

 Score =  952 bits (2461), Expect = 0.0
 Identities = 467/671 (69%), Positives = 565/671 (84%), Gaps = 2/671 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           M+LNP Q  AV++V+GPCLVLAGAGSGKTRVITNKIAYL+++CGY+AR+IAAVTFTNKA+
Sbjct: 1   MRLNPGQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAYLIRECGYQARHIAAVTFTNKAS 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERVAQTLG+ E+RGLM+STFHTLGL I+++E+ ALG+K+ FSLFDDQDQLALLKEL
Sbjct: 61  REMKERVAQTLGRKEARGLMISTFHTLGLEIVKKEYAALGMKSNFSLFDDQDQLALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TE  L+ DK+LL+ L+STI NWKND++ P +A A    E+  +FAHC+ LY + ++S N 
Sbjct: 121 TEPWLENDKNLLQQLISTIGNWKNDLMDPSRAAASVSSERDKIFAHCYGLYDRHLKSCNV 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LL + NEE R+RWQ  IRYLLVDEYQDTNTSQYELVKLLVG R R TVV
Sbjct: 181 LDFDDLILLPTLLFQRNEEARERWQQCIRYLLVDEYQDTNTSQYELVKLLVGTRARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGA+PQNLVLL EDFP+L++IKLEQNYRS+ RIL+AANILIANNPHV++K
Sbjct: 241 GDDDQSIYSWRGARPQNLVLLKEDFPALQVIKLEQNYRSSERILKAANILIANNPHVFEK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
            LFS L  G +LKV+ AN+E+HEA RV  E+IAH F+N+T+Y+DYAILYRGNHQSR+ EK
Sbjct: 301 RLFSTLGYGAELKVVTANHEEHEAGRVTGELIAHHFINKTQYKDYAILYRGNHQSRVFEK 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
            L QNR+PY++SGG+SFF+R EIKD++AYLRVL N +DD+AF+RIVNTPKREIGPATL+K
Sbjct: 361 MLMQNRIPYRISGGSSFFSRPEIKDLLAYLRVLTNENDDSAFMRIVNTPKREIGPATLQK 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG +A  R  SLF+ASF+ GL+Q L+GRGLE+L+RFT WL  IA  AER   V AVR L+
Sbjct: 421 LGEWARQRNNSLFSASFDFGLQQTLTGRGLESLQRFTGWLREIAALAER-EPVNAVRDLI 479

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
             I YE WL+ETS SPKAAEMRMKNV+ L+ W+   LEG + D +  TL +VV R TLRD
Sbjct: 480 CGIDYESWLFETSTSPKAAEMRMKNVNTLFQWMTEMLEGSDID-EPMTLTQVVTRFTLRD 538

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMERGE ++D+D VQLMTLHASKGLEFPYVYL+G EEG+LPHQ+SIDE NVEEERRL YV
Sbjct: 539 MMERGESDEDADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDENNVEEERRLAYV 598

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRAQ+ELTF +C+ERRQ+GEL++P  SRFL ELPQDD++WE ++K V+ E+RM  GQ+
Sbjct: 599 GITRAQKELTFTLCRERRQYGELVRPEPSRFLLELPQDDLQWETERKVVSPEQRMQTGQS 658

Query: 661 HIANLRAMFKK 671
            +A LRAM  K
Sbjct: 659 RVAGLRAMLNK 669