Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., ATP-dependent DNA helicase Rep (EC 3.6.1.-) from Enterobacter asburiae PDN3

 Score =  987 bits (2551), Expect = 0.0
 Identities = 486/671 (72%), Positives = 577/671 (85%), Gaps = 2/671 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           M+LNP Q +AV++V+GPCLVLAGAGSGKTRVITNKIA+L+  CGY+AR+IAAVTFTNKAA
Sbjct: 1   MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIHNCGYQARHIAAVTFTNKAA 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERVAQTLG+ E+RGLM+STFHTLGL+II+RE+ ALG+K+ FSLFDD DQ+ALLKEL
Sbjct: 61  REMKERVAQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQVALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TE  ++ DK LL+ L+STISNWKND++TP QA A+AKGE+  +FAHC+ LY   M++ N 
Sbjct: 121 TEGLIEDDKVLLQQLISTISNWKNDLMTPAQAAAIAKGERDRIFAHCYGLYDAHMKACNV 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LLL+ NEEVR+RWQN+IRYLLVDEYQDTNTSQYELVKLLVG+R R TVV
Sbjct: 181 LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGQRARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGA+PQNLVLL +DFP+L++IKLEQNYRS+ RIL+AANILIANNPHV++K
Sbjct: 241 GDDDQSIYSWRGARPQNLVLLSKDFPALQVIKLEQNYRSSGRILKAANILIANNPHVFEK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
            LFSEL  G +LKV+ ANNEDHEAERV  E+IAH F+N+TEY+DYAILYRGNHQSR+ EK
Sbjct: 301 RLFSELGYGTELKVLSANNEDHEAERVTGELIAHHFVNKTEYKDYAILYRGNHQSRVFEK 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
            L QNR+PYK+SGGTSFF+R EIKD++AYLRVL NPDDD+AFLRIVNTPKREIGPATL+K
Sbjct: 361 MLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLQK 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG +A  R KS+FTASF++GL Q L+GRG ++L RFT WL  +   AER   V AVR L+
Sbjct: 421 LGEWAMTRNKSMFTASFDMGLSQTLTGRGYDSLTRFTHWLGEVQRLAER-EPVAAVRDLI 479

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
             I YE WLYETSASPKAAEMRMKNV+ L+SW+   LEG   D +  TL +VV R TLRD
Sbjct: 480 HGIDYESWLYETSASPKAAEMRMKNVNQLFSWMTEMLEGSEID-EPMTLTQVVTRFTLRD 538

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMERGE  +++D VQLMTLHASKGLEFPYVYL+G EEG+LPHQ+SIDE+NV+EERRL YV
Sbjct: 539 MMERGESEEEADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDEDNVDEERRLAYV 598

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRAQ+ELTF +CKERRQ+GEL++P  SRFL ELPQDD+ WE ++K +T EERM KGQA
Sbjct: 599 GITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDVIWEQERKVITAEERMHKGQA 658

Query: 661 HIANLRAMFKK 671
           ++AN+RAM  K
Sbjct: 659 NVANIRAMLAK 669