Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., DNA helicase Rep from Escherichia coli ECRC62

 Score =  973 bits (2514), Expect = 0.0
 Identities = 481/668 (72%), Positives = 568/668 (85%), Gaps = 2/668 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           M+LNP Q +AV++V+GPCLVLAGAGSGKTRVITNKIA+L++ CGY+AR+IAAVTFTNKAA
Sbjct: 1   MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERV QTLG+ E+RGLM+STFHTLGL+II+RE+ ALG+KA FSLFDD DQLALLKEL
Sbjct: 61  REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TE  ++ DK LL+ L+STISNWKND+ TP QA A A GE+  +FAHC+ LY   +++ N 
Sbjct: 121 TEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNV 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LLL+ NEEVR+RWQN+IRYLLVDEYQDTNTSQYELVKLLVG R R TVV
Sbjct: 181 LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGA+PQNLVLL +DFP+LK+IKLEQNYRS+ RIL+AANILIANNPHV++K
Sbjct: 241 GDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
            LFSEL  G +LKV+ ANNE+HEAERV  E+IAH F+N+T+Y+DYAILYRGNHQSR+ EK
Sbjct: 301 RLFSELGYGTELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEK 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
            L QNR+PYK+SGGTSFF+R EIKD++AYLRVL NPDDD+AFLRIVNTPKREIGPATL+K
Sbjct: 361 FLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKK 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG +A  R KS+FTASF++GL Q LSGRG E L RFT WL  I   AER   + AVR L+
Sbjct: 421 LGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAER-EPIAAVRDLI 479

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
             + YE WLYETS SPKAAEMRMKNV+ L+SW+   LEG   D +  TL +VV R TLRD
Sbjct: 480 HGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELD-EPMTLTQVVTRFTLRD 538

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMERGE  ++ D VQLMTLHASKGLEFPYVY++G EEG LPHQ+SIDE+N++EERRL YV
Sbjct: 539 MMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYV 598

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRAQ+ELTF +CKERRQ+GEL++P  SRFL ELPQDD+ WE ++K V+ EERM KGQ+
Sbjct: 599 GITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQS 658

Query: 661 HIANLRAM 668
           H+ANL+AM
Sbjct: 659 HLANLKAM 666