Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., DNA helicase Rep from Dickeya dianthicola ME23

 Score =  969 bits (2504), Expect = 0.0
 Identities = 472/671 (70%), Positives = 570/671 (84%), Gaps = 2/671 (0%)

Query: 1   MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA 60
           M++NP Q  AV++V+GPCLVLAGAGSGKTRVIT KIA+L++ CGY+AR+IAAVTFTNKAA
Sbjct: 1   MRMNPSQQHAVEFVTGPCLVLAGAGSGKTRVITQKIAHLIRGCGYQARHIAAVTFTNKAA 60

Query: 61  REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL 120
           REMKERVAQTLG+ E+RGL+++TFHTLGL II+RE+ ALG+K+ FSLFDDQDQLALLKEL
Sbjct: 61  REMKERVAQTLGRKETRGLLIATFHTLGLEIIKREYAALGMKSNFSLFDDQDQLALLKEL 120

Query: 121 TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA 180
           TE  L  DKDLL+ L+S +SNWKND++ P QA A+A+ EQ  LFAHC+ LY + +++ N 
Sbjct: 121 TELWLQNDKDLLQQLVSALSNWKNDLIDPAQAAALARSEQDRLFAHCYRLYDEHLRACNV 180

Query: 181 LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV 240
           LDFDDLILLP LLL+ NEEVR+RWQNR+RYLLVDEYQDTNTSQYEL+KLLVG R R TVV
Sbjct: 181 LDFDDLILLPTLLLKRNEEVRERWQNRLRYLLVDEYQDTNTSQYELIKLLVGSRARFTVV 240

Query: 241 GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK 300
           GDDDQSIYSWRGA+PQNL LL +DFP L++IKLEQNYRS+ RIL+AANILIANNPHV++K
Sbjct: 241 GDDDQSIYSWRGARPQNLSLLQQDFPQLQVIKLEQNYRSSGRILKAANILIANNPHVFEK 300

Query: 301 ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK 360
            L+SEL  GE+LK+I ANNEDHEAERV+ E+IAH F+ +T+Y DYAILYRGNHQSRL EK
Sbjct: 301 RLYSELGYGEELKIITANNEDHEAERVVGELIAHHFIRKTQYGDYAILYRGNHQSRLFEK 360

Query: 361 SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK 420
            L QNR+PY++SGGTSFF+R EIKD++AYLRVL NP+DD+AFLR+VNTPKREIGPATL+K
Sbjct: 361 VLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPEDDSAFLRVVNTPKREIGPATLQK 420

Query: 421 LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV 480
           LG +AN R +SLF ASF++GL Q LSGRGLE+L+RFT+W+  IA  AE    V+AVR L+
Sbjct: 421 LGEWANQRNRSLFNASFDMGLSQTLSGRGLESLQRFTQWMGDIARLAE-PEPVKAVRDLI 479

Query: 481 RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD 540
             + YE WLYETS SPKAAEMRMKNV+ L++W+   LEG + D +  TL +VV R TLRD
Sbjct: 480 HGLDYESWLYETSPSPKAAEMRMKNVNTLFTWMTEMLEGSDLD-EPMTLTQVVTRFTLRD 538

Query: 541 MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV 600
           MMER E  ++ + VQLMTLHASKGLEFPYVYL+G EEG+LPHQTSIDE+N++EERRL YV
Sbjct: 539 MMERNEAEEELEQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQTSIDEDNIDEERRLAYV 598

Query: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA 660
           GITRAQ+ELTF +C+ERRQ+GELI+P  SRFL ELPQDD+ WE ++K  + +ERM KGQ 
Sbjct: 599 GITRAQKELTFTLCRERRQYGELIRPEPSRFLLELPQDDVMWETERKVASPQERMQKGQN 658

Query: 661 HIANLRAMFKK 671
           H+ANLRA   K
Sbjct: 659 HLANLRAQLAK 669