Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  411 bits (1057), Expect = e-119
 Identities = 243/641 (37%), Positives = 370/641 (57%), Gaps = 17/641 (2%)

Query: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62
           LNP Q EAV++  GP +++AGAGSGKTRV+T +IA+L++        I A+TFTNKAA E
Sbjct: 7   LNPPQREAVEHTEGPLMIIAGAGSGKTRVLTFRIAHLIRAKNVDPFQILALTFTNKAASE 66

Query: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELT- 121
           M+ R+ + +G  E+R   + TFH++   I+R E + LG  + F+++D  D  +L+K +  
Sbjct: 67  MRNRIERLIGL-EARNTWMGTFHSIFAKILRVESEKLGFPSNFTIYDTDDSKSLIKSIVK 125

Query: 122 EKQLDGDKDLLRLLLSTISNWKNDMLT------PPQAKAMAKGEQQLLFAHCFELYQKQM 175
           EK+LD        +LS IS  KN +++       P  KA  +   +      +  YQK++
Sbjct: 126 EKRLDDKVYKPNTVLSRISGAKNRLISWENYINDPYIKADDEAAMKPRMGEIYRAYQKRL 185

Query: 176 QSYNALDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERG 235
              +A+DFDDL+    +L R + +V  ++Q R RY+LVDE+QDTN SQY + K L     
Sbjct: 186 FKSSAMDFDDLLFNTNVLFRDHPDVLNKYQQRFRYVLVDEFQDTNLSQYLITKKLAAVHQ 245

Query: 236 RLTVVGDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNP 295
            + VVGDD QSIY++RGA  QN++   +D+P L ++KLEQNYRST  I+ AAN +I  N 
Sbjct: 246 NICVVGDDAQSIYAFRGADIQNILNFEKDYPDLHVVKLEQNYRSTKNIVEAANSIIEKNK 305

Query: 296 HVYQKALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQS 355
              +K ++++   G+ +++I + +++ E   V + I   K   + +  D+AILYR N QS
Sbjct: 306 AQLKKNVWTQNGNGDLIELIKSASDNEEGRMVASTIFEEKNNKKLQNSDFAILYRTNSQS 365

Query: 356 RLIEKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGP 415
           R +E++L +  + YK+ GG SF+ R EIKD+MAY R +VN DD+ AF RI+N PKR IG 
Sbjct: 366 RALEEALRKMNISYKIVGGLSFYQRKEIKDLMAYFRYVVNQDDEEAFKRIINYPKRGIGL 425

Query: 416 ATLEKLGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEA 475
           +++EK+   A      L+           LSGR   ++  F   + +     ER +  EA
Sbjct: 426 SSVEKMMVAAYEHDIPLW--QVVTNSSSFLSGRASNSVSDFATMIKSFQMEVERKDAYEA 483

Query: 476 VRALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQR 535
              + +       LYE          R +NV +L + I   +  DNP+ ++K L   +Q 
Sbjct: 484 ASTIAKQSGLLRELYEDKTI--EGLNRYENVQELLNAIKEYV--DNPENEDKNLGAFLQE 539

Query: 536 LTLRDMMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSI-DEENVEEE 594
           + L  + +   + D+ DAV LMT+H+SKGLEF  V+++G EE + P Q  +   E++EEE
Sbjct: 540 IAL--LTDNDRDKDEMDAVTLMTIHSSKGLEFRQVFVVGLEEDLFPSQMMMQSREDLEEE 597

Query: 595 RRLMYVGITRAQRELTFIVCKERRQFGELIKPSQSRFLDEL 635
           RRL YV  TRA  +L       R +FG L+    SRFL+E+
Sbjct: 598 RRLFYVATTRAMEKLYLSYAITRYRFGRLLNCEPSRFLEEI 638