Pairwise Alignments

Query, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., ATP-dependent DNA helicase Rep from Acinetobacter radioresistens SK82

 Score =  692 bits (1785), Expect = 0.0
 Identities = 345/675 (51%), Positives = 482/675 (71%), Gaps = 6/675 (0%)

Query: 2   KLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAAR 61
           +LN +Q EA+KY  GP LVLAGAGSGKT VIT KIAYL+QQC   A  I A+TFTNKAAR
Sbjct: 6   QLNNKQLEAMKYTQGPLLVLAGAGSGKTSVITRKIAYLIQQCRIPAHRITAMTFTNKAAR 65

Query: 62  EMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKELT 121
           EMKERV + L + E +GL VSTFHT GLN++R E K   LK  FS+ D  D   +L +L 
Sbjct: 66  EMKERVGKLLSREEIKGLSVSTFHTFGLNMLRLELKNTPLKNNFSILDADDCKRILMDLM 125

Query: 122 EKQ-LDG--DKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSY 178
            +  L G   K+L+   +  IS+WKND++ P QA +  +  + +  AH ++LY++ +++Y
Sbjct: 126 HRDNLSGAESKELIAKAMKKISDWKNDLILPEQAHSTCETPEDVQMAHLYQLYERNLRAY 185

Query: 179 NALDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLT 238
           NA+DFDDLI++P  LL+ N EVR +WQNR+RYLLVDEYQDTNT+QY LVKLLVG  G+ T
Sbjct: 186 NAVDFDDLIVMPTRLLQENAEVRDKWQNRVRYLLVDEYQDTNTAQYILVKLLVGVMGQFT 245

Query: 239 VVGDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVY 298
            VGDDDQSIY+WRGAKP+N+ LL +DFP+LK+IKLEQNYRSTSRIL++AN +IANNPH++
Sbjct: 246 AVGDDDQSIYAWRGAKPENMALLQQDFPNLKVIKLEQNYRSTSRILKSANAVIANNPHIF 305

Query: 299 QKALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLI 358
            K L+S+   G+ ++VI   N+D EAERV+ +I+ HK +N   ++DYA+LYRGN Q+R++
Sbjct: 306 DKQLWSDKGHGDVIRVITCRNDDDEAERVVKDILTHKLMNARSWKDYAVLYRGNFQARVL 365

Query: 359 EKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATL 418
           E  L Q ++PYKLSGG SFFARAEIKD+M+YLR+++NP+DD+AFLRI+NTPKR IGP TL
Sbjct: 366 ETQLRQMQIPYKLSGGQSFFARAEIKDVMSYLRLIINPEDDSAFLRIINTPKRAIGPVTL 425

Query: 419 EKLGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIA-DNAERGNTVEAVR 477
           EKLG +A     SL +A+ +  L   +  + +  L  F +++     +  +    V  +R
Sbjct: 426 EKLGLFAQDNHLSLLSAAGDQRLTMVIPKKAVTQLHEFADFIGNFTRELLDDDEPVPKIR 485

Query: 478 ALVRDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLT 537
            ++ +  Y D++ E +A+P   + ++ N+  LYS  +  L     D  +K ++ V++++ 
Sbjct: 486 QMMNEAGYIDYIREQAATPAQEKSKLDNIESLYS-SIQSLINRAEDVDDKNIESVIRKMV 544

Query: 538 LRDMMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRL 597
           L DM+E+ +E +D D V L+TLHA+KGLEFPYVY+IG EE +LPH+ SI  E +EEERRL
Sbjct: 545 LLDMLEQQQEEEDIDKVNLLTLHAAKGLEFPYVYMIGLEEELLPHKNSIASETIEEERRL 604

Query: 598 MYVGITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEW-EVKKKPVTQEERMA 656
           MYVGITRA++ LT  + ++R+  G++ + + SRFLDELPQD++EW   KKK V   +   
Sbjct: 605 MYVGITRARQALTLTLAEQRKNGGQMKQMTPSRFLDELPQDEVEWLGRKKKLVANVDPKE 664

Query: 657 KGQAHIANLRAMFKK 671
           + Q ++ NL+A+ K+
Sbjct: 665 QAQQYLQNLKALLKR 679