Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system from Variovorax sp. SCN45

 Score =  207 bits (526), Expect = 5e-58
 Identities = 122/349 (34%), Positives = 194/349 (55%), Gaps = 4/349 (1%)

Query: 11  IAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGFIEPNQGV 70
           +A L+ G   GF L  + + A +      P   V V TA        +  IG +E N+ V
Sbjct: 13  LATLVLGGA-GFGLAMKLRPA-HAEGGGMPPAKVAVATAQKTQVARFLSGIGTLEANRQV 70

Query: 71  TLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLF 130
            +  E  G + +I F  G +V   Q LV L+ A E+ +++   A+   AKA  ER + L 
Sbjct: 71  EVPAEVEGRVAKILFTPGGEVRAGQLLVQLNDAPEQGDMERLTAQRANAKALLERTRRLL 130

Query: 131 AKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTD 190
            + + ++E  ++A+A++   S D+   +A + ++ IKAPF GV+GIR V LGQ+++ G  
Sbjct: 131 PQQAATQEQLEQAQAAFDQASGDLRRAQAVLEQKRIKAPFDGVLGIRRVNLGQFVRAGDA 190

Query: 191 IVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLI 250
           +V L D+  +    T+P+  +  +  +Q+V + VDAYP   F+G +S IEP +   +  +
Sbjct: 191 LVSLTDSRTLFANLTLPETALPVLKRNQQVALSVDAYPGRVFQGRLSTIEPQIGSDTRTV 250

Query: 251 QVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIV--SEENGEK 308
           ++QA I N+DG L  GMF    + LP   + +T+P+TAITY+ +GD+V++V  +E+    
Sbjct: 251 RLQATIDNADGALTPGMFVNGKVALPARPDAITVPETAITYSTHGDSVFVVRPAEKGDGF 310

Query: 309 RVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESD 357
             QQ  VK GER + +  I  G+ PGD VVT+GQ+RL  GA V     D
Sbjct: 311 TAQQVFVKAGERQDGLVVIENGLAPGDKVVTSGQLRLYTGAAVMPTAKD 359