Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 2e-37
 Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 14/351 (3%)

Query: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEA 60
           M K T   L +  LL  S +         ++    N+P P   V   +         +  
Sbjct: 1   MNKNTVLSLTLLTLLMNSAV---------LSAKEPNQP-PAISVVTESVQSQQISQSLSV 50

Query: 61  IGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAK 120
           +G ++  Q V +  E AG +D I  ++  QV K Q L+ LD    +A L   +A L   +
Sbjct: 51  VGKLKAEQSVDIAAEVAGKVDMIAVQANQQVKKGQILIKLDDDKAQAALVEAKAYLQDEQ 110

Query: 121 AKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVF 180
            K   Y+ L  + +I+    D   A      A + + +A +A   I APF G +G  +  
Sbjct: 111 RKLTEYERLLKRNAITPTEIDAQRARVEIGQARLNAAQANLADLHITAPFDGTVGFIDFS 170

Query: 181 LGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIE 240
            G+++  G++++ L++ S+MRL   +P+R + ++S   +V    +A+P   F+GS+ A++
Sbjct: 171 RGKWVSAGSELLTLDNLSLMRLDLQIPERYLPQLSKGMKVQGSSEAWPNVQFEGSVVAVD 230

Query: 241 PAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYI 300
             ++ ++  ++V+   PN D +L+ GM   A I  P +   + +P  A+ Y+     VY+
Sbjct: 231 SRINQETLNLRVRVHFPNPDQRLKPGMLMSARIHFPAISAPI-IPVQALEYSGTKRFVYV 289

Query: 301 VSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKV 351
           + E+N  KR +   V +G R E+   I +G++ G+ +V  G V + + A+V
Sbjct: 290 IGEDNVAKRRE---VSLGARVENQVVIEKGLQIGEKIVVQGIVNMRDNARV 337