Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  211 bits (536), Expect = 3e-59
 Identities = 126/373 (33%), Positives = 200/373 (53%), Gaps = 10/373 (2%)

Query: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEA 60
           M K    ML+   +L G +IGFNLFK   I +++A+   P   VT   A+   W P + A
Sbjct: 7   MIKRMIIMLICVGVLLGGLIGFNLFKTHMIKKFMASNAVPSATVTSAVASYQQWQPQLSA 66

Query: 61  IGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAK 120
           +G +   +GV +TTE AG++ +I F SG +V   Q LV L+   +RA L S +A    A+
Sbjct: 67  VGSLRAVRGVDVTTEVAGLMREIAFSSGQEVKAGQVLVRLNDDSDRAQLASLQAAAELAQ 126

Query: 121 AKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVF 180
             Y+R +  F   +I+K   D   A   +  A ++   A + ++ I+APFAG +GI  V 
Sbjct: 127 TVYKRDEAQFDIQAIAKAQLDADAADLKSKKAQVDQQAALVEKKTIRAPFAGRVGITTVN 186

Query: 181 LGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIE 240
            GQY+ PG  IV L+    +   F +PQ+ + R+ + Q + +  +A+   +F G I +I 
Sbjct: 187 PGQYINPGDAIVTLQAIDPIYADFYLPQQQLGRLQVGQAIVVDTNAFSNRTFDGKIRSIN 246

Query: 241 PAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYI 300
           P V   +  +Q++A + N + KL  GM+A   I    ++  +TLPQTAITY  YG  V++
Sbjct: 247 PRVDSTTRNVQIEATVDNRERKLLPGMYANVKIDAGGVQRYLTLPQTAITYNPYGATVFV 306

Query: 301 V---SEENGEKRV----QQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRI 353
           V   +++N + ++    QQ  V +G        I +G+  G  VVT+GQ++L NG  + I
Sbjct: 307 VKPGAQKNAQGKIVPVAQQVFVTLGPTRGDQVAIFKGIGEGTQVVTSGQLKLKNGTPLVI 366

Query: 354 VESDATTPPAETP 366
              D    PA++P
Sbjct: 367 ---DNRVQPADSP 376