Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  117 bits (292), Expect = 6e-31
 Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 2/313 (0%)

Query: 43  PVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDS 102
           PV V      D    +   G  E    V +    +G ++++T + G +V K Q +  LD 
Sbjct: 39  PVVVTPVKSTDESGQVRLSGSAEAETAVDMGFMVSGKVNRVTVQEGERVKKGQLIASLDP 98

Query: 103 AVERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIA 162
                 +    A L   + +YER   +  +GSI+   Y +A ++   + A  +     + 
Sbjct: 99  RDYSLAVDIANANLSRVQDEYERLTIMHERGSIAPADYQKAVSALQEVKARQQLAVKNLQ 158

Query: 163 RREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDI 222
             ++ AP +GV+  R    G+ +  G  +  +     +++R +VP+ ++ +++L QE  +
Sbjct: 159 ETKLYAPISGVVARRGTDPGEIISQGLPLFSVVSIEPIQVRASVPEAEVGQVALGQEAQV 218

Query: 223 FVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQV 282
            + A   T F G ++ I       S    V+ ++PN    +R GM A A +   + E  +
Sbjct: 219 TIPALDST-FSGKVALIGAVADPASRAYTVKINVPNPKHLIRPGMVAEATVASNRTEQVL 277

Query: 283 TLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQ 342
            +P  AI   + G N Y+   +  + +  +  V VG    +   I  G+   D+VVT GQ
Sbjct: 278 VIPGEAILRDV-GGNTYVFVVDRQKNQAFRRNVTVGSFFGNNIEITSGLTQNDLVVTGGQ 336

Query: 343 VRLSNGAKVRIVE 355
            RL++ A +RIVE
Sbjct: 337 QRLNDAAPIRIVE 349