Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., efflux transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  132 bits (333), Expect = 1e-35
 Identities = 98/358 (27%), Positives = 171/358 (47%), Gaps = 12/358 (3%)

Query: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQK---IAEYLANRPEPEFPVTVVTANPVDWVPV 57
           MKK    + ++A+L+    IG+ L   +K       +A R     PV + T         
Sbjct: 1   MKK---IIYIVAVLVALGAIGYTLMNNKKEMAATAAIAERKSESIPVALTTPKVGAVDKS 57

Query: 58  IEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLP 117
             A G   P Q +TL +ET G + +I  ++G +V   + L  +D+ + RA L   +A   
Sbjct: 58  FTAQGNFIPEQDLTLLSETQGQVLKIYKQNGDRVKAGEMLAQVDAQLLRAELVRAQANYT 117

Query: 118 AAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIR 177
            +K   ER++ L    +I+K   ++A   +    A + + K  +A   IKAP +G I  +
Sbjct: 118 KSKRDLERFENLAEGDAITKRQLEDARLGFSNAEAALITAKKRLADASIKAPISGRINEK 177

Query: 178 NVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSIS 237
            + +G YL PGT +  + +   +++   VP+  +  I   Q+V I  DA    +F+G++ 
Sbjct: 178 FIEVGSYLSPGTKLFNIVNVDNLKMNVKVPESQVGLIRDGQKVQIKADAVGGETFEGTVK 237

Query: 238 AIEPAVSVQSGLIQVQADIPN-SDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGD 296
           AI  A    S    V+  + N SD  L++GM+  A   +      + + + AI  +L   
Sbjct: 238 AI-AAKGDNSLNYNVELQVSNPSDNPLKAGMYGTAYFEVADQRKALLIEREAIVGSLQNP 296

Query: 297 NVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIV 354
            V++V+  NG   ++   +KVG    +   +  G++ GD VV +GQ+ L NG KV ++
Sbjct: 297 QVFVVN--NGSAFLKD--IKVGGTQGNKVEVTGGLEAGDKVVQSGQINLKNGTKVTVL 350