Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., Secretion protein HlyD precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  104 bits (259), Expect = 4e-27
 Identities = 95/371 (25%), Positives = 163/371 (43%), Gaps = 24/371 (6%)

Query: 2   KKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDW-VPV-IE 59
           K+W +  + +A++L G    F        A   A   +P   +TV  A PV   +P+ ++
Sbjct: 10  KRWLWLAIALALVLLGVFWVFIKKPGNPEATAPAAEAKPRPSLTVTVAQPVHGNLPIRLQ 69

Query: 60  AIGFIEPNQGVTLTTETAGV-IDQITFESGTQVAKDQPLVLL-------DSAVERANLKS 111
           A G I   Q  ++  E  G+ +  +    G  V K Q L +        DS   +A+L  
Sbjct: 70  ANGNITAWQEASVGAEVNGLRLASVNVNVGDLVRKGQVLAVFASETTKADSLQSQASLAQ 129

Query: 112 TEARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIK---- 167
            EA    AKA  +R + +   G++SK    +         A +E+ KA     E++    
Sbjct: 130 AEASFENAKADADRARSIQDTGALSKSQVAQYLTQERVARAQLEAAKAAFGATEVRLGNT 189

Query: 168 ---APFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFV 224
              AP  GVI  R   +G  +  G ++ R+   S M  R  V   ++ R+ + Q+V   V
Sbjct: 190 RVLAPDDGVISARTATVGAVVGAGQELFRMVRQSRMEWRGEVTPNEVGRVRVGQKVQ--V 247

Query: 225 DAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTL 284
            A       G + AI P    Q+  I V  D+P    +L++G FA+ +  L +  + +T+
Sbjct: 248 TAATGLEITGQVRAIAPGADPQTRNILVFVDLPRH-AELKAGTFAKGSFDLGQ-SDALTV 305

Query: 285 PQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVR 344
           P  AI      + V+++   + + +  Q  V+ G R +    +LEG+KP + V   G   
Sbjct: 306 PSQAIVVRDGSNYVFVI---DAQSKANQRKVQTGRRVDDRVEVLEGLKPDEAVAVQGAGF 362

Query: 345 LSNGAKVRIVE 355
           L+    V++V+
Sbjct: 363 LNEADLVKVVQ 373