Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  111 bits (277), Expect = 4e-29
 Identities = 87/335 (25%), Positives = 158/335 (47%), Gaps = 25/335 (7%)

Query: 43  PVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDS 102
           PV   TA        +  +G I     VT+ +   G +  I F+ G QV     L  +D 
Sbjct: 61  PVQAATAVNKAVPRYLTGLGTITAANTVTVRSRVDGQLMAIHFQEGQQVKAGDLLAEIDP 120

Query: 103 -------AVERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIE 155
                  A  +  L   +A L  A+    RY+ L     +S++  D  ++        I+
Sbjct: 121 SQFKVALAQAQGQLAKDKATLANARRDLVRYQQLVKTNLVSRQELDTQQSLVSETQGTIK 180

Query: 156 SLKATIARREIK-------APFAGVIGIRNVFLGQYLQPG--TDIVRLEDTSVMRLRFTV 206
           + +A +A  +++       AP  G +G++ V +G  +  G  T IV +  T  + L FT+
Sbjct: 181 ADEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVITQTHPIDLVFTL 240

Query: 207 PQRDISRISLDQEVD--IFVDAYPQTS----FKGSISAIEPAVSVQSGLIQVQADIPNSD 260
           P+ DI+ +   Q+    + V+A+ +++     +GS+ +++  +   +G I+++A   N D
Sbjct: 241 PESDIATVVQAQKAGKGLVVEAWDRSNKQKLSEGSLLSLDNQIDTTTGTIKLKARFNNQD 300

Query: 261 GKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGER 320
             L    F  A +++   EN V +P  A+     G+ V++++++N   +V +H+VK G +
Sbjct: 301 DALFPNQFVNARMLVATEENAVVIPTAALQMGNEGNFVWVLNDDN---KVSKHLVKTGIQ 357

Query: 321 SESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVE 355
                 I  G+  G+ VVT G  RL+ GAKV +VE
Sbjct: 358 DSQTVVIAAGLSAGERVVTDGIDRLTEGAKVEVVE 392