Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dadantii 3937

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 25/368 (6%)

Query: 10  LIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGFIEPNQG 69
           ++  L+FG+V+ + L+ +Q        R  P   V++V A        +   G +     
Sbjct: 10  IVVSLMFGAVMLYFLYSRQSTVS-ATPRSAPVPLVSLVPAQVKSLPLTLATQGHVVSLNQ 68

Query: 70  VTLTTETAGVIDQITFESGTQVAKDQPLVLLD-----SAVERANLKSTEAR--LPAAKAK 122
           V + ++  G +  + F+ G  V + Q L  LD     + + RA     E+R  L  A+  
Sbjct: 69  VDIQSQITGTVKSVEFKEGDVVHQGQLLFTLDDNTQQTTLHRAVASQAESRSLLDKAQRD 128

Query: 123 YERYKGLFAKGSISKESYD-------EAEASYYALSADIESLKATIARREIKAPFAGVIG 175
             R + L A+  IS   +D       + +A + A   DI S +A +    I AP  G  G
Sbjct: 129 LNRGRALKAQNYISASDWDALQSARQQYDAQFNAARDDIRSAQAQLGYTRIYAPVNGKTG 188

Query: 176 IRNVFLGQYLQPGTDI--VRLEDTSVMRLRFTVPQRDISRISLDQE---VDIFVDAYPQT 230
             NV  G  +QPG+ +  V +     + + FT+P++D++ +   Q    V ++V+     
Sbjct: 189 ALNVHPGSLVQPGSSLPLVTVSQFDPIGVSFTLPEKDLNPVLAAQAQGPVRVWVNNAKGP 248

Query: 231 SFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAIT 290
           + +G +  I   VS +SG I ++A   N+   L  G +   N+     EN V LP  AI 
Sbjct: 249 AVEGVLDFINNTVSTESGTIALKARFSNAGNLLWPGAYQAVNVD-AGTENVVVLPPQAIQ 307

Query: 291 YTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAK 350
               G  VYI+ + N       +++++ ++      +++G+  G  VV  G   L  G  
Sbjct: 308 NGPDGHFVYIIDKHNQAVMQPVNLLRIQQQMA----VVDGISQGTNVVIEGANNLRPGMN 363

Query: 351 VRIVESDA 358
           V + ++DA
Sbjct: 364 VAVAKADA 371