Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  117 bits (293), Expect = 5e-31
 Identities = 89/354 (25%), Positives = 169/354 (47%), Gaps = 12/354 (3%)

Query: 1   MKKWTFFMLLIAILLFGSVIGFNLFKQQKIAEYLAN---RPEPEFPVTVVTANPVDWVPV 57
           MKK    ++++AI    + IGF LFK ++  E  A    +     PV   T         
Sbjct: 1   MKKLITPLIIVAI---AAAIGFTLFKNKQEMEVKAEQAMKTSESIPVRTETIKKTAHKIS 57

Query: 58  IEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLP 117
             + G  EP+Q +TL  E +G + +I  + G  V K   +  LD  + ++ L  +E +L 
Sbjct: 58  FTSNGTFEPSQELTLKAEASGKVLKIYKKKGDYVRKGDVIAKLDDELIQSELSISEVKLR 117

Query: 118 AAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIR 177
             +    RY+ L    +I+++  +E   +    ++ ++  K  +A   I AP +G I   
Sbjct: 118 QNEKDLGRYENLAGTEAITEKQLEEIRNATKMAASQVKMNKKRLANTAITAPISGYINED 177

Query: 178 NVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSIS 237
            + +G  + PG ++V + +   ++L   V + +I+RIS+   V + V   P+  F G +S
Sbjct: 178 YIEIGTLMSPGMNVVDIVNVKPLKLVVNVSELEIARISVGDSVAVKVGVLPEKDFTGKVS 237

Query: 238 AIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDN 297
                    S   +V+  +     +++ GMFA A+   P  E  + + + A+   +    
Sbjct: 238 FTSNKGDA-SLRYEVEIALQEETAQIKPGMFAYASFEYP-AEEAILIDRKALANGVKNPE 295

Query: 298 VYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKV 351
           V++V  ENG+  +++  VK+ +  ++   +L+G+K GD +VT+G + L +G  V
Sbjct: 296 VFVV--ENGKAVLKK--VKLAQVGDNKLVLLDGLKEGDKLVTSGLINLKDGTAV 345