Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  155 bits (391), Expect = 2e-42
 Identities = 102/359 (28%), Positives = 177/359 (49%), Gaps = 11/359 (3%)

Query: 1   MKKWTFFMLLIAILLFGSVI-------GFNLFKQQKIAEYLANRPEPEFPVTVVTANPVD 53
           MKK T  ++++AI++  +VI       G +  K+   +           PV VV   P  
Sbjct: 1   MKKQTKILVIVAIVVVIAVIFLFPRLQGGDTSKEPSKSPQSTPEAMTALPVDVVEVTPER 60

Query: 54  WVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTE 113
               +   G +  N+ V+L  E  G+++ I FE G  V K  PLV L+     A L   E
Sbjct: 61  LENNLNVTGNVLSNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLE 120

Query: 114 ARLPAAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGV 173
                 + +  R K L A+ +IS+E YD     Y    +DI+ +KA + +  IKAPF GV
Sbjct: 121 YTKKLYEGQESRQKQLLAREAISQEEYDIILNQYNTTLSDIKLVKAQLDKTVIKAPFDGV 180

Query: 174 IGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFK 233
           +G+R +  G  +     I  + +   +++ F++P+R  S++ +   ++ F +       K
Sbjct: 181 LGLRQISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIE-FSNNASHGLKK 239

Query: 234 GSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTL 293
           G + A EP +   +  + ++A  PN D K   GMF      L   E+ + +P  ++   L
Sbjct: 240 GKVYAYEPVIDANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPEL 299

Query: 294 YGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVR 352
            G  +++V++E     VQ+  V++G R++S   IL+G+ PG++V+TTG ++   G KV+
Sbjct: 300 NGYKLFLVNQEG---IVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKVK 355