Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., efflux RND transporter periplasmic adaptor subunit from Bacteroides stercoris CC31F

 Score =  142 bits (359), Expect = 1e-38
 Identities = 81/296 (27%), Positives = 159/296 (53%), Gaps = 5/296 (1%)

Query: 58  IEAIGFIEPNQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLP 117
           I+  G + P++ V L+ ET+G I +I FE G+ V K Q L  ++    +A L+   ++L 
Sbjct: 66  IQISGSLLPDEEVDLSFETSGKIIEINFEEGSFVKKGQLLAKVNDRPLQAQLQRLVSQLK 125

Query: 118 AAKAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIR 177
            A+ +  R   L  + ++SKE+Y++ +     L+ADI+ +++ IA+ E++APF GVIG+R
Sbjct: 126 LAEDRVFRQNALLERDAVSKEAYEQVKTELATLNADIDLIESNIAQTELRAPFDGVIGLR 185

Query: 178 NVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSIS 237
            V +G Y  P T + +L   S +++ F VP+R  + +     +D  ++    T F  ++ 
Sbjct: 186 QVSVGTYASPSTIVAKLTKLSPLKVEFAVPERYANDVKTGAGLDFTLEGKLNT-FHATVY 244

Query: 238 AIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDN 297
           A E  +   +  + ++A  PN++  +  G +A   +   +++N + +P  AI   +  D 
Sbjct: 245 ARESKIDPTTHTLTIRALYPNANSAVLPGRYASIKLNKDEIQNALAVPSEAIVPEMGKDK 304

Query: 298 VYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRI 353
           +++        + Q   +  G R+E+   +L+G+  GD ++T+G ++L  G  V +
Sbjct: 305 IFLYK----SGKAQPVEITTGIRTEAEVQVLQGLNIGDTIITSGTLQLRTGLPVTL 356