Pairwise Alignments

Query, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Acriflavine resistance protein A precursor from Alteromonas macleodii MIT1002

 Score =  112 bits (280), Expect = 2e-29
 Identities = 101/373 (27%), Positives = 168/373 (45%), Gaps = 37/373 (9%)

Query: 7   FMLLIAILLFGSVIGFNLFKQQKIAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGFIEP 66
           F +  A++    VIG +   +Q         P P   V  +   PV    V+   G + P
Sbjct: 5   FYVTAALITLVGVIGCSNEGEQAQQGAQQGMPAPSVSVVTLKQEPVVHEMVLP--GRVSP 62

Query: 67  NQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSA-------VERANLKSTEARLPAA 119
           ++   +  +  GVI +  FE G  V K Q L  +D A         +A+LKS +A L   
Sbjct: 63  SRQSQVRPQVDGVITERLFEEGAHVEKGQQLYQIDEARYLAQLNSAKADLKSVQANLKTL 122

Query: 120 KAKYERYKGLFAKGSISKESY-------DEAEASYYALSADIESLKATIARREIKAPFAG 172
           +AK  RY  L A+ ++SK+ Y       D+A+A+     A ++  K  +   ++ AP +G
Sbjct: 123 EAKARRYDDLVAQNAVSKQEYDDVIAQKDQAQAAISVAEAAVDVAKVNMGYTKVYAPISG 182

Query: 173 VIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQRDISRISLDQ--------EVDIFV 224
            I    V  G  +           T +  +   + +   S I+L Q        +V++ V
Sbjct: 183 RISRSFVTEGTLVTTNQSQQLATITQLDPVFIDMQESGASIITLRQSMRNQGSMDVELTV 242

Query: 225 D-----AYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIILPKLE 279
           D      Y QT   GS+   E  V   +G + ++A++PN DG L  G+F + ++I  + E
Sbjct: 243 DEVTGKRYDQT---GSVKFSEVTVDETTGSVTLRAEMPNPDGVLLPGLFVKGHVITGR-E 298

Query: 280 NQVTLPQTAITYTLYGD-NVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGDVVV 338
           N + +PQ A T    G  +VY+V++ N    V+   +++G+        L GV  G+ V+
Sbjct: 299 NALLVPQRATTRQPDGSLSVYVVNQNN---EVEGRTLEIGKIYRDQYVALSGVSEGEKVI 355

Query: 339 TTGQVRLSNGAKV 351
            TG  ++  GAKV
Sbjct: 356 VTGYQKVKPGAKV 368