Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system from Variovorax sp. SCN45

 Score =  929 bits (2401), Expect = 0.0
 Identities = 477/1024 (46%), Positives = 688/1024 (67%), Gaps = 1/1024 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M+FTD+F++RPVLA+ +S LI+LLG +A+  + VR+YP   +T +T++T Y GAS +L+Q
Sbjct: 1    MKFTDLFVRRPVLALVVSTLILLLGARALGDLPVRQYPLTESTTLTITTQYPGASPELMQ 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
            GF+TQP+ QAVA  +N+D+++S S LGRS I+V MKLN D N AL+  +A+ + V+ +LP
Sbjct: 61   GFVTQPIAQAVATIENVDYLSSSSTLGRSVISVRMKLNADANQALTQAMAQISQVKYRLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
             EA DP +  S+G  TAV Y+GF+S  +    +TDYL RVV PQ  ++ GVS +++ GG 
Sbjct: 121  AEAFDPVILKSSGEATAVAYVGFSSKTMPMPALTDYLSRVVQPQFASITGVSGVEVSGGQ 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
              A+RVWLDP +MAA  +SA ++   L  NN Q+A GQ  G +V+ N   +T +  V + 
Sbjct: 181  TLAMRVWLDPNRMAARGISAGELADALRQNNVQAAPGQVKGLYVVSNIRVNTDLVNVAEF 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
              +VVK +   + RLGD+A V L  +     A+ +G  A+   + AAP+ NP+ I K + 
Sbjct: 241  RDMVVKRDGDAIVRLGDVATVELGAASADSSATMDGVPAIYLGLQAAPNGNPLVIVKRIR 300

Query: 301  EMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLI 360
            E+LP +++N+P  +E+ + ++    I  SI EV KT++EA  IV++VI L LGS+RAVLI
Sbjct: 301  ELLPGIKQNLPPGVEVQLPFELARFIEASIDEVQKTLLEAIAIVVIVIFLCLGSVRAVLI 360

Query: 361  PIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF 420
            P+VTIPLS++G A +M + GFS NL+TLLAMVLAIGLVVDDAIVV+ENV RHI+EG+S  
Sbjct: 361  PVVTIPLSMLGAAALMLLFGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSRV 420

Query: 421  RAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTL 480
            +AA+IG RE+A PVIAMTLTL AVYAPI LMGG+TGSLFKEFA TLAG+V VSG++ALTL
Sbjct: 421  QAALIGAREVAGPVIAMTLTLAAVYAPIGLMGGLTGSLFKEFAFTLAGAVVVSGVIALTL 480

Query: 481  SPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPM 540
            SP+M S +L  +   ++          ++   Y R+L   + HR V   FA +V ASLP 
Sbjct: 481  SPVMSSFLLPQDTTGSRMARAAEAFFHKLATGYGRLLDVSLHHRWVTGVFAALVLASLPF 540

Query: 541  LFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFTGVP 600
            L+     ELAP ED+ +++     P +AN+DY+       +++ +  PE     +  G  
Sbjct: 541  LYNSAQRELAPGEDQAMVLTAIKSPQHANIDYVEKFGKKWDEVFAALPENTGRWLINGSD 600

Query: 601  NSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQFV 660
              + + G   +  W  R+ +   +       + D+ G +V AFQ+P LPG+  GLP+Q V
Sbjct: 601  GVSNSIGGVQLSDWKDRKRNADQIQGDTQGRMNDVEGSSVFAFQLPSLPGSTGGLPVQMV 660

Query: 661  ITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQDI 720
            I + ++  ++F     +    + +  F+  D DL F++ T++I +D+ KA + GVTM+ I
Sbjct: 661  IRSAADHRTVFEAMEALKKSARDSGKFIVVDSDLEFNNPTVEIRVDRAKANSLGVTMKSI 720

Query: 721  GITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSLVT 780
            G TL+ ++ + YVNR  ++GRSY+VIPQ  R+ RL  E+++ Y+V++A G+ +PL +LV 
Sbjct: 721  GDTLAVLVGENYVNRFGMDGRSYDVIPQSPREQRLTAEALSRYFVKSASGQPVPLANLVQ 780

Query: 781  IDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGEARQ 840
            +     P  L  FNQLN++T  A+PAPG  MGDA+ +    A  KLP G+S+D+  +ARQ
Sbjct: 781  LSTSVGPNKLTQFNQLNASTFQAIPAPGVTMGDAVAFLSEEA-KKLPAGFSYDWQSDARQ 839

Query: 841  YVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMNI 900
            +  EGSAL   F  A+ +I+LVLA Q+ESLRDPL+I++SVP++ICGAL+ LA G  T+NI
Sbjct: 840  FTQEGSALVMAFVFAIVVIYLVLAAQYESLRDPLIILISVPMSICGALVPLALGFGTINI 899

Query: 901  YSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIAG 960
            Y+Q+GL+TL+GLI+KHGIL+ E A E Q++  L R  ++  AA++RLRPILMTTAAM+ G
Sbjct: 900  YTQIGLVTLIGLISKHGILMVEFANEIQMNKGLDRRASIEEAARIRLRPILMTTAAMVVG 959

Query: 961  LIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKPLPVFVEDKDL 1020
            L+PL++A+GAGA  RFSIG+VIV G+ +GTLFTLFVLP +Y+ LA  H+         +L
Sbjct: 960  LVPLLFASGAGANSRFSIGLVIVVGMLVGTLFTLFVLPTMYTLLARDHRAAGRSQRAAEL 1019

Query: 1021 EKLA 1024
            E LA
Sbjct: 1020 EALA 1023