Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1028 a.a., RND multidrug efflux transporter; Acriflavin resistance protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  734 bits (1896), Expect = 0.0
 Identities = 409/1009 (40%), Positives = 615/1009 (60%), Gaps = 9/1009 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M+  ++ I+RPV A  +S LI+L+G+ +   + VREYP++    +TVST + GAS+++I+
Sbjct: 1    MQLPEISIRRPVFASVLSLLILLVGIVSFNGLTVREYPKIDEPTVTVSTRFGGASSEVIE 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              +T+PLE ++A  + +D +TS S   +S ITV  KL  DP++A +DV  K + VR +LP
Sbjct: 61   SQVTKPLEDSLAGIEGLDVITSISRQEQSQITVRFKLERDPDSAAADVRDKVSRVRQRLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            ++ ++P +       + V+++  TS+  ++ Q++D+  R+  P L    G + + +YG  
Sbjct: 121  QDVDEPVIAKVEADASPVIWLALTSDTHSALQLSDFANRLAKPVLQTAPGAAEVRVYGER 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
            +Y++R+W+DP ++AA  L+  DV   L  +N +   G+       +N +A T + T    
Sbjct: 181  RYSMRIWMDPDRLAAYALTVQDVEDALRRSNLEVPAGRIESTLREFNVTAATDLQTPAQF 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
             ++ ++   G   R+GD+A+V  A   +      NGR+AV   +    +ANP+ ++  V 
Sbjct: 241  AAVAIRTINGQTIRIGDVARVVQAPQDERTSVRLNGRDAVSLGVIRQATANPLELSAAVR 300

Query: 301  EMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLI 360
            +ML ++++++P+ + ++V  D++V I+ SI  V  TI EA ++V +VI +FL +LRA +I
Sbjct: 301  QMLEKVKQDLPAGVNVDVANDNSVFIDRSIKAVYTTIAEAVVLVALVIFVFLRTLRASII 360

Query: 361  PIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF 420
            P++TIP+SLIG   +M M GFS N +TLLA+VLAIGLVVDDAIV+LEN+ RHI+EG  PF
Sbjct: 361  PLMTIPVSLIGAFALMAMFGFSINTLTLLALVLAIGLVVDDAIVMLENIYRHIEEGMKPF 420

Query: 421  RAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTL 480
             AAI G REI   ++AMTLTL AVYAP+A   G TG LF EFAL LAG+V VSG VALTL
Sbjct: 421  DAAIQGAREIGFAIVAMTLTLAAVYAPLAFTPGRTGRLFAEFALALAGAVVVSGFVALTL 480

Query: 481  SPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIA-FAFIVFASLP 539
            SPM+CSK+L+ N  P +F+  +  +L+ +T  + R L A +  R +V+A  A    AS  
Sbjct: 481  SPMLCSKLLRHNPNPGRFDRGMERVLNAVTRGFSRALGASLRVRWLVVAVMAGSALASAW 540

Query: 540  MLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFTGV 599
            ML + +  ELAP ED+GVI+    GP  A L Y     + +  I  D PE  F ++F  V
Sbjct: 541  ML-QTMRQELAPIEDRGVILANINGPDGATLAYTRKYAEAIENIAQDYPE--FDRIFVNV 597

Query: 600  PNSNQAFGIASM--VPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPI 657
             N + A G+  M  +PW +RE S   +   +   +  +PG++      P L       PI
Sbjct: 598  GNPSVAQGVVFMRALPWEERERSTQRIAREITPRLASLPGISAFPITPPSLGQGFRERPI 657

Query: 658  QFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTM 717
             +VI T  ++E+L         E+  NP  V  D DL  +   +++++D+++A   GV +
Sbjct: 658  NYVIVTSDSYENLAQTVRRFQDELSKNPGLVQIDTDLRLNKPEIRMDVDRERAADMGVNV 717

Query: 718  QDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGS 777
              I  T+ TM+    V R   +G  Y+V+ Q     R  PE ++  +VR  +  +IPL S
Sbjct: 718  DAIARTVETMLGGRIVTRYKRDGEQYDVVVQTVSGNRSTPEDIDRLFVRGRNDAMIPLAS 777

Query: 778  LVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGE 837
            LV I  V  PR L HF Q  SA++ A  AP  A+G+A+ + +  A   LP GY+ D  G+
Sbjct: 778  LVKISEVVVPRELNHFGQRRSASLTANLAPDYALGEALQFMDKTAREVLPAGYTTDLNGQ 837

Query: 838  ARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTAT 897
            +R++     +L   F L+L  I+LVLA QFES  DP +IM+SVPL++ GAL+AL     T
Sbjct: 838  SREFRNASGSLAIVFALSLLFIYLVLAAQFESFVDPFIIMLSVPLSMMGALLALKLTGGT 897

Query: 898  MNIYSQVGLITLVGLITKHGILICEVAKEEQLHNK-LSRIEAVMHAAKVRLRPILMTTAA 956
            +N++SQ+GLITLVGLITKHGILI E A   QL ++ L + EAV  +A +RLRPILMTT A
Sbjct: 898  INVFSQIGLITLVGLITKHGILIVEFA--NQLRDQGLEKFEAVRQSAALRLRPILMTTGA 955

Query: 957  MIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLA 1005
            M+ G IPL  A+GAGA  R  IG VIV G+++GTL T+FV+P +Y+ L+
Sbjct: 956  MVLGAIPLALASGAGAESRQQIGWVIVGGMSVGTLLTIFVVPTMYTLLS 1004