Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Enterobacter asburiae PDN3

 Score =  518 bits (1335), Expect = e-151
 Identities = 330/1023 (32%), Positives = 539/1023 (52%), Gaps = 30/1023 (2%)

Query: 7    FIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQP 66
            FI RP+ A  I+ +I+L G  AI K+ V +YP +    +T+S  Y GA A  +Q  +TQ 
Sbjct: 5    FIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISATYPGADAKTVQDTVTQV 64

Query: 67   LEQAVAQADNIDFMTSQS-VLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAED 125
            +EQ +   DN+ +M+S S   G   IT+T +  TD + A   V  K       LP+E + 
Sbjct: 65   IEQNMNGIDNLMYMSSNSDSTGTVQITLTFQSGTDADIAQVQVQNKLQLAMPLLPQEVQQ 124

Query: 126  PTVTMSTGSTTAVLYIGF--TSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKYA 183
              V++   S++ ++ +G   T+  +    I+DY+   +   +   +GV  + L+G  +YA
Sbjct: 125  QGVSVEKSSSSFLMVVGVINTNGTMTQEDISDYVGANMKDAISRTSGVGDVQLFGS-QYA 183

Query: 184  LRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVL----YNGS--ADTQVSTV 237
            +R+W+DP K+    L+  DV+S + A N Q A GQ  G   +     N S  A T++++ 
Sbjct: 184  MRIWMDPNKLNNFQLTPVDVISAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRLTSA 243

Query: 238  EDLESLVVKAEK-GTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIA 296
            ++   +++K  + G+  RL D+AKV L   +    A  NG+ A    I  A  AN ++ A
Sbjct: 244  DEFSKILLKVNQDGSQVRLRDVAKVELGGENYDIIAKFNGKPASGLGIKLATGANALDTA 303

Query: 297  KDVLEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLR 356
              +   L +++   PS +++   YD+T  +  SIHEV+KT+VEA ++V +V+ LFL + R
Sbjct: 304  TAIRAELKKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFR 363

Query: 357  AVLIPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHI-KE 415
            A LIP + +P+ L+G   ++ + G+S N +T+  MVLAIGL+VDDAIVV+ENV+R + +E
Sbjct: 364  ATLIPTIAVPVVLLGTFAILSIFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GESPFRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGI 475
            G  P  A      +I   ++ + + L AV+ P+A  GG TG+++++F++T+  ++ +S +
Sbjct: 424  GLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVL 483

Query: 476  VALTLSPMMCSKMLKANEAPNKFELK-----VHHLLDRMTARYERMLTAVMAHRPVVIAF 530
            VAL L+P +C+ MLK  +     E K      + + D+ T  Y   +  ++      +  
Sbjct: 484  VALILTPALCATMLKPIQKGGHGEHKGFFGWFNRMFDKSTHHYTDSVGNILRSTGRYLLL 543

Query: 531  AFIVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKIL----SD 586
              I+   +  LF  +PS   P ED+GV + M   P+ A+ +     +D+V         D
Sbjct: 544  YIIIVVGMAFLFVRLPSSFLPDEDQGVFLTMAQLPAGASQERTQKVLDEVTDYYLTKEKD 603

Query: 587  QPEVQFAQVFTGVPNSNQAFGIA--SMVPWSQREASQ---ATVTNRVGTLVQDIPGMAVT 641
              E  FA    G     Q  GIA  S+  WS+R   +     +T R       I    V 
Sbjct: 604  NVESVFAVNGFGFAGRGQNTGIAFVSLKDWSERPGEKNKVEAITGRAMGTFSQIKDAMVF 663

Query: 642  AFQMPELP--GAGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNF-DS 698
            AF +P +   G  +G   Q +       E L      +  EV  +P  +         D+
Sbjct: 664  AFNLPAIVELGTATGFDFQLIDQGGLGHEKLTQARNQLFGEVAKHPDLLVGVRPNGLEDT 723

Query: 699  ATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPE 758
               KI+ID++KA A GV++ DI  TL       YVN     GR  +V    E ++R+ P 
Sbjct: 724  PQYKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAQYRMLPN 783

Query: 759  SMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWF 818
             +NS++VR ++G+++P  +  T         L  +N L S  +    APG + G+A+N  
Sbjct: 784  DINSWFVRGSNGQMVPFSAFSTSRWEYGSPRLERYNGLPSMEILGQAAPGRSTGEAMNLM 843

Query: 819  ENLASSKLPKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMV 878
            E LAS KLP G  +D+ G + Q    G+   A + ++L ++FL LA  +ES   P  +M+
Sbjct: 844  EELAS-KLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVML 902

Query: 879  SVPLAICGALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEA 938
             VPL + GAL+A  +   T ++Y QVGL+T +GL  K+ ILI E AK+         IEA
Sbjct: 903  VVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLIEA 962

Query: 939  VMHAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLP 998
             + A ++RLRPILMT+ A I G++PL+ ++GAG+  + ++G  ++ G+   T+  +F +P
Sbjct: 963  TLEAVRMRLRPILMTSLAFILGVLPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVP 1022

Query: 999  VIY 1001
            V +
Sbjct: 1023 VFF 1025