Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  497 bits (1279), Expect = e-144
 Identities = 312/1023 (30%), Positives = 531/1023 (51%), Gaps = 33/1023 (3%)

Query: 17   ISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQPLEQAVAQADN 76
            IS   VLLG    F + V  +P++    +++   Y GA+++++   +T PLE+A+     
Sbjct: 3    ISLFFVLLGALTFFSLPVALFPDIAPPAVSIRAKYRGANSEVVAKTVTTPLEKAINGVPG 62

Query: 77   IDFMTS-QSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAEDPTVTMSTGST 135
            + +M+S  S  G S I V     T P+ A  +V  + ++V + LP++     VT+     
Sbjct: 63   MMYMSSVSSNRGTSKIKVYFGAETSPDEAAMEVQNRVSTVVNDLPQDVIKAGVTVEKEVE 122

Query: 136  TAVLYIGFTSNELASSQ--ITDYLERVVNPQLYAVNGVSSIDLYGGMKYALRVWLDPAKM 193
              +LYI    ++ +  +  I ++ +  V  +L  V+GV   ++     Y++R+WL P +M
Sbjct: 123  GLLLYINVMGSDPSMDEQFIYNFSDLNVLQELRRVDGVGFAEIMSTKDYSMRIWLKPDRM 182

Query: 194  AALNLSAADVMSILNANNYQSATGQAI------GEFVLYNGSADTQVSTVEDLESLVVKA 247
             A  +S  +V + LN  N ++A GQ         + + Y      + +  ++ E+LV++A
Sbjct: 183  TAYQVSTDEVKAALNNQNVEAAPGQVGVSSGKGAQMIQYGLRYSGKFNEAKEYENLVIRA 242

Query: 248  EK-GTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVLEMLPEL 306
             K G++ RLGDIA V     +    +  +G+ A    I   P +N  ++ + V + + EL
Sbjct: 243  NKDGSILRLGDIADVEFGSLNYGRISKTDGKPAASIMIIQRPGSNARDVIQRVKKRMEEL 302

Query: 307  -QKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLIPIVTI 365
             Q + P  ++  + YD +  ++ SIHEV+KT++EA ++V +V+ +FL   R+ LIP + +
Sbjct: 303  KQGSFPPGVDYKITYDVSRFLDASIHEVLKTLIEAFILVFLVVFIFLQDFRSTLIPALAV 362

Query: 366  PLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGE-SPFRAAI 424
            P++LIG    MQ+ GFS N++TL A+VLAIG+VVD+AIVV+E V   ++E    P  A +
Sbjct: 363  PVALIGTLFFMQLFGFSINMLTLFALVLAIGIVVDNAIVVVEAVHAKMEEDHLPPMEATL 422

Query: 425  IGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTLSPMM 484
               ++I   ++++TL + AV+ P+A + G  G  +++F++TLA ++ +SGI ALTL+P +
Sbjct: 423  AAMKDIGGAIVSITLVMSAVFIPVAFLDGPVGIFYRQFSITLAIAIVISGINALTLTPAL 482

Query: 485  CSKMLKANEAP-------NKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFAS 537
            C+ +LK +          N F    +   +  + +Y   L  ++  R V +      F  
Sbjct: 483  CAIILKNHYGTEQKKTLLNTFFNGFNRAYESFSGKYRNTLGVLVGRRLVTVIMLVAFFIG 542

Query: 538  LPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVF- 596
               + K +PS   P ED+ ++ +    PS A ++     +D + +   +  EV       
Sbjct: 543  TWGVAKVLPSGFIPVEDQSMVYINVVSPSGATVERTEKVLDHIQQAAEELDEVAAVSTLA 602

Query: 597  -----TGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGA 651
                 TG+  ++   G+ ++  W +REAS     + +     DI    V  F  P + G 
Sbjct: 603  GYSLSTGLSGASYGMGMINLKNWDEREASIQETIDELYARTADISDAQVQFFLPPTVSGF 662

Query: 652  GSGLPIQFVI---TTPSNFESLFTIATDVLTEVKANPMF--VYSDLDLNFDSATMKINID 706
            G+    Q  +   T   N + L  +  D +  +   P    V SD D NF      +N+D
Sbjct: 663  GNSSGFQMKVLDQTGSGNLQKLSLVIEDFVEALDNAPEIGEVKSDFDPNFPQ--YMVNVD 720

Query: 707  KDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVR 766
            +D A   GVT+ +   TL  +M     +        Y+V+ Q   ++R NPE +   +V+
Sbjct: 721  QDMAAKKGVTISNAMSTLQILMGGVLASDFVRFENMYDVMMQAGPQYRANPEDVLKVHVK 780

Query: 767  AADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKL 826
               G+++P+ S + ++ V  P  L   N   SA V  +PAPG + GDA+   + +A+ KL
Sbjct: 781  NDGGEMVPISSFINLEKVYGPEQLSKHNMYTSAKVKGIPAPGYSSGDAVAAIQRVAAEKL 840

Query: 827  PKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICG 886
            PKGY +D+ G  RQ V+ G+     F + L  ++L+LA Q+ES   PL +++ +P  + G
Sbjct: 841  PKGYGYDWYGMTRQEVSSGNQAIYIFIICLVFVYLLLAAQYESFVLPLPVILFLPAGVFG 900

Query: 887  ALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVR 946
            +  AL       NIY+QV LI L+GL+ K+ ILI E A  ++    +  I A +  A  R
Sbjct: 901  SFAALYLLGLQNNIYAQVALIMLIGLLGKNAILIIEFAVLKRKEG-MDIIPAAITGAVSR 959

Query: 947  LRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAE 1006
            LRPILMT+ A +AGL+PL  ATGAGA    SIG   + G+  GT+F +F++P +Y   + 
Sbjct: 960  LRPILMTSFAFMAGLVPLCMATGAGALGNRSIGTAALGGMFSGTVFGMFLIPGLYVLFSS 1019

Query: 1007 KHK 1009
            + K
Sbjct: 1020 RRK 1022