Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1020 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  634 bits (1634), Expect = 0.0
 Identities = 360/1013 (35%), Positives = 581/1013 (57%), Gaps = 9/1013 (0%)

Query: 6    VFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQ 65
            V I+RPVLA+  S  I+L G+  +  + VREYP +   +I V T Y GA+AD+I+  IT+
Sbjct: 7    VSIRRPVLAIVFSLTILLFGIIGMTFLGVREYPSVDPPIINVRTTYVGANADVIEAQITE 66

Query: 66   PLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAED 125
            PLE+++     I  +TS S  G S ITV   +  D  AA +DV  K +  +  LP +AE 
Sbjct: 67   PLEESINGISGIKSLTSTSNDGTSNITVEFDVGADMEAAANDVRDKVSRAQRNLPPDAEP 126

Query: 126  PTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKYALR 185
            P V+ +   +  ++++   S + +  Q++D  + +   +L  + GVS + ++G  +YA+R
Sbjct: 127  PVVSKADADSEPIVFLNVKSEQKSLLQLSDIADNIFKERLQTIPGVSEVRIWGEKEYAMR 186

Query: 186  VWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDLESLVV 245
            + +DP +MA+  ++  DV++ + + N +  +G+  G  +  +    +++ST ++  +L++
Sbjct: 187  LRMDPIRMASYGVTPLDVLTKVQSENVELPSGRIEGSTIELSVRTKSRLSTPDEFNNLII 246

Query: 246  KAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVLEMLPE 305
            K  +  + R  D+    LA  ++      +G   V   +   P +N I+I  +    L  
Sbjct: 247  KESENNIVRFQDVGNAELAPLNERTVLKRDGVPMVGVVLVPLPGSNSIDIVDEFYRRLEF 306

Query: 306  LQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLIPIVTI 365
            ++K++P +IE+ + +DST  I  SI EV +TI+ A L+V+ +I LFL   R   IP++TI
Sbjct: 307  IKKDLPEDIELGIGFDSTEYIRNSISEVQETILLAFLLVVAIIFLFLRDWRTTFIPVITI 366

Query: 366  PLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPFRAAII 425
            P+SL+GV  +M  M FS N++TLL +VL+IGLVVDDAIVVLEN+   I++GE P  AA  
Sbjct: 367  PISLVGVFFIMYTMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYSKIEKGEQPEAAAEK 426

Query: 426  GTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTLSPMMC 485
            G  EI   VIA T+ L AV+ P+  + G TG LF+EF + +AGSV +S  VALT++PM+ 
Sbjct: 427  GAEEIFFAVIATTIALAAVFLPVIFLTGTTGRLFREFGVVVAGSVIISSFVALTMTPMLS 486

Query: 486  SKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPMLFKFI 545
            SK+LK  E  N F          +  +YE  L   M  R V       +   + +LF  I
Sbjct: 487  SKLLKKREKHNWFYNVTEPGFLWLNKKYEAALVWFMQFRWVSFIIILAMGGGIYLLFNTI 546

Query: 546  PSELAPSEDKGVIMLMGTGPSNANLDYLANTMDD-----VNKILSD--QPEVQFAQVFTG 598
            PSELAP+ED+G + +  +GP  A  +Y+   +D+     +  I SD     +       G
Sbjct: 547  PSELAPTEDRGEMRINMSGPEGATFEYMDRVIDELLYEMMTTIPSDVWDSFISVTSPGFG 606

Query: 599  VPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQ 658
              ++N  F    +V  SQR  SQ  V   V  +++    +   A Q   +     G+PIQ
Sbjct: 607  TASTNSGFIRVRLVDASQRTVSQQAVFEDVAEILRKKTDVKAFASQPQSIGDRRGGMPIQ 666

Query: 659  FVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQ 718
            +V+    N E L  +    + EV  +P+F +SD++L F    +++ ID++KA   GV++Q
Sbjct: 667  YVLQA-QNLEKLKEVIPAFMDEVTQSPIFQFSDINLKFTKPEIEVEIDREKARNIGVSVQ 725

Query: 719  DIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSL 778
            +I  TL    +    +   +NG+ Y+V+ +++++ R  P ++   YVRA +G+++ L +L
Sbjct: 726  EIARTLQLSYSGQRFDYFIMNGKQYQVVGEMQKEDRNEPINLRMLYVRAENGQLVQLDNL 785

Query: 779  VTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGEA 838
            V I   + P  L  FN+  SATV A  AP   +GD ++  + +A+  L + ++ D  G +
Sbjct: 786  VNITEKSTPPQLYRFNRFVSATVSAGLAPKYTIGDGLDEMDRIAAEVLDESFTTDVAGVS 845

Query: 839  RQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATM 898
            +++    ++L   F  AL +I+LVL+ QFES  DPL IM++VPLA+ GAL++L  G  T+
Sbjct: 846  KEFRESSNSLIFAFLFALILIYLVLSAQFESFTDPLTIMITVPLALFGALLSLWLGGYTL 905

Query: 899  NIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMI 958
            NI+SQ+G+I L+GL+TK+GILI E A + + H  L   EA++ AA  R RPILMT+ + I
Sbjct: 906  NIFSQIGIIMLIGLVTKNGILIVEFANQRKAHG-LEVDEAIIGAAVARFRPILMTSLSTI 964

Query: 959  AGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKPL 1011
             G++P+  A GAGA  R  +G+ ++ GL + T+ TLFV+P +Y+YL  K   L
Sbjct: 965  LGILPIALALGAGAESRSPMGVAVIGGLVLSTILTLFVIPGVYTYLTSKSSRL 1017