Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., efflux RND transporter permease subunit from Bacteroides stercoris CC31F

 Score =  619 bits (1597), Expect = 0.0
 Identities = 340/1011 (33%), Positives = 570/1011 (56%), Gaps = 4/1011 (0%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  +++ I+RPVL+  ++ +I+L G      + VREYP + N +I+VS  Y GA+AD+I+
Sbjct: 1    MNISELSIRRPVLSTVLTLIILLFGFIGYNYLGVREYPSVDNPIISVSCSYPGANADVIE 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              IT+PLEQ +     I  ++S S  G S ITV  +L+ D   A +DV  K +  +  LP
Sbjct: 61   NQITEPLEQNINGIPGIRSLSSVSQQGSSRITVEFELSVDLETAANDVRDKVSRAQRYLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
            ++ + PTV+ +      +L +   S++ +  ++++  +  V  QL  ++ VSS+ ++G  
Sbjct: 121  RDCDPPTVSKADADAMPILMVALQSDKRSLLELSEIADLTVKEQLQTISDVSSVSIWGEK 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
            +Y++R+WLDP KM+   ++  DV + ++  N +  +G   G  +         + T E+ 
Sbjct: 181  RYSMRLWLDPIKMSGYGITPIDVKNAVDNENVELPSGSIEGNTIELTIRTLGLMHTAEEF 240

Query: 241  ESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDVL 300
             +L++K +   + R  DI +  L  +        NG   V   +   P AN I IA  V 
Sbjct: 241  NNLILKEDGNRIVRFSDIGRAELGPADIKSYMKMNGVPMVGVVVIPQPGANHIQIADAVY 300

Query: 301  EMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVLI 360
            E +  ++K++P ++  +  +D+T  I  SI EV +T+ EA ++V+++I LFL   R  L+
Sbjct: 301  ERMENMKKDLPEDVHYSYGFDNTKFIRASIDEVKQTVYEAFVLVIIIIFLFLRDWRVTLV 360

Query: 361  PIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESPF 420
            P + IP+SLIG   VM + GFS N++++LA+VLA+GLVVDDAIV+ EN+   I++G  P 
Sbjct: 361  PCIVIPVSLIGAFFVMYLAGFSINVLSMLAIVLAVGLVVDDAIVMTENIYVRIEKGMPPK 420

Query: 421  RAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALTL 480
             A I G +EI   VI+ T+TL AV+ PI  M G+TG LF+EF++ ++GSV +S   ALT 
Sbjct: 421  EAGIEGAKEIFFAVISTTITLVAVFFPIVFMDGMTGRLFREFSIVVSGSVIISSFAALTF 480

Query: 481  SPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAFIVFASLPM 540
            +PM+ +K+L   E  + F  K     + +   Y R L A +  R + + F       +  
Sbjct: 481  TPMLATKLLIKREKQSWFYRKTEPFFEGLNNLYSRSLAAFLRKRWIALPFTAATILIIGF 540

Query: 541  LFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVFTGVP 600
            L+  IP+E+AP ED+  I +   G      +Y+ +  +D+N+++     V  A+  T   
Sbjct: 541  LWNHIPAEMAPLEDRSQISINTRGAEGVTYEYIRDYTEDINQLVDS--IVPDAEAVTARV 598

Query: 601  NSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQFV 660
            +S       ++     R+ +Q  V  ++   VQ          Q     G   G+P+Q+V
Sbjct: 599  SSGSGNVRITLKDMQDRDYTQMEVAEKLSKAVQKKTMARSFVQQSSSFGGRRGGMPVQYV 658

Query: 661  ITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQDI 720
            +   +N E L  +    + +V  NP+F  +D+DL F     +INI++DKA   GV+ ++I
Sbjct: 659  LQA-TNIEKLQEVLPKFMAKVYENPVFQMADVDLKFSKPEARININRDKASIMGVSTRNI 717

Query: 721  GITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSLVT 780
              TL   ++   +    +NG+ YE++ ++ R+ R  P  +   Y+R+  G ++ L +L+ 
Sbjct: 718  AQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNKPADLKGIYIRSDKGDMVQLDNLIE 777

Query: 781  IDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHDYMGEARQ 840
            +     P  L  +N+  SAT+ A  A G  +G  ++  + +A   L   +     G++++
Sbjct: 778  LTNGIAPPKLYRYNRFVSATISAGLADGKTIGQGLDEMDKIAKETLDDTFRTALTGDSKE 837

Query: 841  YVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMNI 900
            Y    S+L   F LA+ +I+L+LA QFES +DPL+IM++VPLAI GAL+ + +G  TMNI
Sbjct: 838  YRESSSSLMFAFILAILLIYLILAAQFESFKDPLIIMLTVPLAIAGALVFMYFGGITMNI 897

Query: 901  YSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIAG 960
            +SQ+G+I L+GL+ K+GILI E A ++Q   +  +++A+  AA  RLRPILMT+A+ + G
Sbjct: 898  FSQIGIIMLIGLVAKNGILIVEFANQKQETGE-DKMQAIKDAALQRLRPILMTSASTVLG 956

Query: 961  LIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKPL 1011
            LIPL +ATG G  QR ++G  +V G+ + TL T++++P IYSY++     L
Sbjct: 957  LIPLAFATGEGCNQRIAMGTAVVGGMLVSTLLTMYIVPAIYSYVSTNRSKL 1007