Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1035 a.a., putative efflux pump membrane transporter TtgB from Alteromonas macleodii MIT1002

 Score =  609 bits (1570), Expect = e-178
 Identities = 371/1031 (35%), Positives = 574/1031 (55%), Gaps = 14/1031 (1%)

Query: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60
            M  +DV +KRPV A  I+ L+++ G+ A   + +REYP++   +++VST Y GASA++++
Sbjct: 1    MLLSDVSVKRPVFATVINLLLIIFGIVAFTMLSLREYPDIDPPIVSVSTTYTGASANIVE 60

Query: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120
              ITQ LE  ++  + I  +TS S  GRS IT+  KL+ D +AA +DV  + +   + LP
Sbjct: 61   TRITQLLEDRISGIEGIKNVTSTSRNGRSDITIEFKLSRDIDAAANDVRERVSRALNNLP 120

Query: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180
             +A+ P V+ +    +AV++    S  L + ++TDY ERV+  +L  V+GV+ + + GG 
Sbjct: 121  DQADPPEVSKANSDESAVVWYNLRSTNLNTMELTDYAERVLVDRLSIVDGVARVQIGGGR 180

Query: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGEFVLYNGSADTQVSTVEDL 240
            +YA++V+LD   MAA  ++  DV  ++   N +   G+       +         T +D 
Sbjct: 181  RYAMKVFLDRNAMAARGITVNDVEQVIRTENVELPAGEVESTDRNFEVRVARTFLTPDDF 240

Query: 241  ESLVVK-AEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKDV 299
             +L V   + G + RLG+IA V L    D      +G   +   I     AN +++A+  
Sbjct: 241  AALTVAIGDNGYLVRLGEIAHVELTAEDDETEFRGDGVNMIGLGIIKQSKANTLDVARAA 300

Query: 300  LEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359
               +  ++  +P NI +   YDS+V I  SI EV +T+  A L+V++VI LFLG++RA L
Sbjct: 301  KAQIERIEATLPDNIFIVPSYDSSVFIEASIDEVYETLGIAMLMVVIVIYLFLGNIRATL 360

Query: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419
            IP VT+P+S+I   +VM  +GFS NL+TLLAMVLAIGLVVDDAIVVLEN+ R I+ GE P
Sbjct: 361  IPAVTVPVSIIAAFIVMYALGFSINLLTLLAMVLAIGLVVDDAIVVLENIYRRIEMGEPP 420

Query: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479
              AA  G +E+   VIA TL L +V+ P+  + G  G LF EFAL +A +V  S   ALT
Sbjct: 421  ILAAYRGAKEVGFAVIATTLVLISVFVPLVFLEGNIGRLFTEFALAIAAAVAFSSFTALT 480

Query: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERMLTAVMAHRPVVIAFAF-IVFASL 538
            LSPMM SK+LK     + F   +     ++   Y   L   + H+P+++     I   +L
Sbjct: 481  LSPMMASKILKKRTRSSGFGSWMDKKFSKLENGYFNTLGKTL-HQPILMLLMLAIAIVAL 539

Query: 539  PMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKIL---SDQPEVQFAQV 595
              L + + SE  P ED+G   ++      A+ +  A  ++ +  IL    +  ++    V
Sbjct: 540  VQLSEKVASEFVPKEDRGNFFILMNAQEGASFESNAKNLEKIESILMPYRESGKINRLLV 599

Query: 596  FTGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGL 655
             T     N    I     W +R+ S  ++ + +   +  +P +   A     + G G G 
Sbjct: 600  RTPGFGGNAGIAIVGSADWDERDFSTFSLMDEISAKLNSVPDVRAFAIMRSGISGGGLGR 659

Query: 656  PIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGV 715
            P+QFV+     +E+L      VL +   NP  +  D D    S  + +NI++D+    GV
Sbjct: 660  PVQFVL-QGDTYENLVEWRDIVLQKAAQNPRLIRLDSDYKETSPQLLVNINRDRVADLGV 718

Query: 716  TMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQ-VERKWRLNPESMNSYYVRAA-DGKVI 773
            ++ DIG TL  M+    V+     G  Y+VI + +E  +R +P S+ + YVR++  G++I
Sbjct: 719  SISDIGGTLEVMLGQRRVSTFLDRGEEYDVIMEGIEEDFR-SPNSIENLYVRSSRTGELI 777

Query: 774  PLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPGTAMGDAINWFENLASSKLPKGYSHD 833
            P+ +L+T +  A    L  +N++ + T+ A  A G  +G A+ + EN+ S++LP   S D
Sbjct: 778  PMDNLLTFEEQATSAQLNRYNRMRAVTISANLADGYTLGQALEYLENIVSTELPDNVSID 837

Query: 834  YMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAW 893
            Y GE++ Y   G++    F LALA+ +L+LA QFES   PLVIM++VPLA+ GA I L +
Sbjct: 838  YKGESQLYQEAGNSFVYVFMLALAVTYLILAAQFESWVHPLVIMLTVPLALVGAYIGLFF 897

Query: 894  GTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIE-AVMHAAKVRLRPILM 952
               T+NIYSQ+GL+ L+GL  K+GILI E A   QL +     E A+  AA  RLRPI+M
Sbjct: 898  SDMTINIYSQIGLVMLIGLAAKNGILIVEFA--NQLRDAGMEFEYALKRAAAQRLRPIVM 955

Query: 953  TTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEK-HKPL 1011
            T    +   +PL+ A+G GA  R  IG+VI SG+ +    TL+V+P  YS+LA     PL
Sbjct: 956  TGFTTVFSSLPLVLASGPGAESRMVIGMVIFSGVLVSAFMTLYVVPTAYSWLARNTGSPL 1015

Query: 1012 PVFVEDKDLEK 1022
               +E + LE+
Sbjct: 1016 QRTMEIETLEQ 1026