Pairwise Alignments

Query, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1059 a.a., Multidrug resistance protein MexB from Acinetobacter radioresistens SK82

 Score =  518 bits (1335), Expect = e-151
 Identities = 333/1055 (31%), Positives = 561/1055 (53%), Gaps = 59/1055 (5%)

Query: 7    FIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQP 66
            FI RP+ A  I+ +I+L G+  + KM + +YP +    +T++  Y GASA+ ++  +TQ 
Sbjct: 5    FIHRPIFAWVIALVIMLAGVLTLTKMPIAQYPTIAPPTVTIAATYPGASAETVENTVTQI 64

Query: 67   LEQAVAQADNIDFMTSQSV-LGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLPKEAED 125
            +EQ +   D + +++S S   G+++I +  +   DP+ A   V  K  S  + LP++ + 
Sbjct: 65   IEQQMNGLDGLRYISSSSAGNGQASIQLNFEQGIDPDIAQVQVQNKLQSATALLPEDVQR 124

Query: 126  PTVTMSTGSTTAVLYIGFTS--NELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKYA 183
              V ++    + +  I F S  + L+ + I DY+   ++  L  V GV  + ++GG  YA
Sbjct: 125  QGVRVTKSGASFLQVIAFYSPDDSLSDADIKDYVNSNISEPLSRVAGVGEVQVFGG-SYA 183

Query: 184  LRVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIG------EFVLYNGSADTQVSTV 237
            +R+WLDPAK+++  L+ +DV + + + N Q A GQ  G      + +    +A + + T 
Sbjct: 184  MRIWLDPAKLSSFQLTPSDVANAIRSQNAQVAVGQLGGAPLTKDQVLNATVTAQSLLQTP 243

Query: 238  EDLESLVVK-AEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIA 296
            E+  ++ +K    G   R+GD+AKV L  +   + +  N + A   AI  A  AN ++ A
Sbjct: 244  EEFSNVFLKNTASGAQVRIGDVAKVELGSADYGFISKYNNKPAAGVAIKLATGANALDTA 303

Query: 297  KDVLEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLR 356
            + V   L EL+ + P  +   + +D+T  I  SI  V+ T+VEA ++V +V+ LFL + R
Sbjct: 304  EAVEARLKELRTSYPQGMVDVLAFDTTPFIKLSIESVVHTLVEAVILVFIVMFLFLQNWR 363

Query: 357  AVLIPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEG 416
            A +IP + +P+ ++G   V+ + GFS N +T+ AMVLAIGL+VDDAIVV+ENV+R + E 
Sbjct: 364  ATIIPTLAVPVVVLGTFAVINIFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 417  E-SPFRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGI 475
               P  A  +  ++I+  +I +T  L AV+ P+A  GG TG ++++F++TL  ++ +S I
Sbjct: 424  HLDPVTATELSMKQISGALIGITSVLTAVFVPMAFFGGTTGVIYRQFSITLVTAMILSLI 483

Query: 476  VALTLSPMMCSKMLK---ANEAPN-----KFELKVHHLLDRMTARYERMLTAVMAHRPVV 527
            VALT +P +C+ +LK    N+AP+     +F    +H  DRM+ RY+  ++ ++ HR + 
Sbjct: 484  VALTFTPALCATLLKQHDPNKAPSNNIFARFFRWFNHKFDRMSHRYQNGVSKLLHHRIIS 543

Query: 528  IAFAFIVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQ 587
              F  +V   L +LF+ +PS   P ED+GV+M +   P NA+L      +D +     + 
Sbjct: 544  GVFYVVVIGILVLLFQKLPSSFLPDEDQGVVMTLVQLPPNASLSRTEQVVDTMTGFFLEN 603

Query: 588  PEVQFAQV-------FTGVPNSNQAFGIASMVPWSQREASQATVTNRVGTLVQDIPGMA- 639
             +     V       FTGV   N       +  WS+R   +A    ++G ++Q   GMA 
Sbjct: 604  EKEYVQSVFSVAGFSFTGV-GQNAGLAFIRLKDWSERTTPEA----QIGAIIQ--RGMAL 656

Query: 640  ---------VTAFQMPELPGAGSGLPIQFVITTP--SNFESLFTIATDVLTEVKANPMFV 688
                     V   Q+P +P  G      F++     +  E L      +L     +P  +
Sbjct: 657  NVIAKDASYVMPLQLPAMPELGVTAGFSFMLKDAGGNGHEKLMAARNAILGMAAQDPRLM 716

Query: 689  YSDLDLNFDSATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQ 748
                +   D+   KI+ID+ +AGA GV++ DI  T+S      Y+N     GR   V  Q
Sbjct: 717  GVRPNGQEDTPQYKISIDQAQAGAMGVSIADINSTMSIAWGGSYINDFVDRGRVKRVYVQ 776

Query: 749  VERKWRLNPESMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSATVGAVPAPG 808
             +   R+ PE ++ +YVR   G+++P  +  T +       L  +N ++S  +   PAPG
Sbjct: 777  GQADTRMMPEDLDKWYVRNNQGQMVPFSAFATGEWTYGSPRLERYNGISSVNIQGTPAPG 836

Query: 809  TAMGDAINWFENLASSKLP----KGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLA 864
             + GDA+   + +  +KLP    +GY +++ G + +    GS   A   L++ I+FL LA
Sbjct: 837  VSSGDAMLAMQEI-MAKLPSMGMQGYDYEWSGLSLEENEAGSQTAALLALSILIVFLCLA 895

Query: 865  IQFESLRDPLVIMVSVPLAICGALIALAWG-------TATMNIYSQVGLITLVGLITKHG 917
              +ES   P  +++ +PL I GA+I    G         + NIY +V +I ++GL  K+ 
Sbjct: 896  ALYESWSIPFSVLMVIPLGIVGAVILTFLGMMISKDPNLSNNIYFKVAIIAVIGLAAKNA 955

Query: 918  ILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFS 977
            ILI E AK+ Q   +   +EA +HAA++RLRPI+MTT A   G++PL  ++GAGA  + S
Sbjct: 956  ILIVEFAKDLQEEGE-ELLEATLHAARMRLRPIIMTTLAFGFGVLPLALSSGAGAGSQHS 1014

Query: 978  IGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKPLP 1012
            +G  ++ G+   TL  +F +PV Y ++    K  P
Sbjct: 1015 VGYGVLGGVISSTLLGIFFIPVFYVWIRSIFKQKP 1049