Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 4/261 (1%)

Query: 1   MNIKTLQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPA 60
           M ++ LQ+F  +CD +++S+ A  M L+  A+S QI++LE+ +G  LF    + + +T A
Sbjct: 8   MTLRQLQIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMTEA 67

Query: 61  AHQLLPVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYI 120
           A  L   +  I         +L+D    L+G++KL    +A Y  +P L ++F+ +HP +
Sbjct: 68  AEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAIESSAKY-FVPHLFAAFKRQHPEV 126

Query: 121 EFKLLTGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIAPLGIS-SFMD 179
           +  L   + AQ I ++  +  D+ I +M  Q    +EF      P+  +AP     S   
Sbjct: 127 QLHLTVVNRAQVIRRLSDNRDDLVIMSMVPQ-DMGLEFLPFLNNPIVAVAPHDHPLSLQG 185

Query: 180 ELQKEQPDWNEIPFIVPESGTARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVG 239
            L+ +  +   +    P SGT R     +FK+ ++      ++A  EA    V  G GV 
Sbjct: 186 PLRLQDLEPYTLLLREPGSGT-RLACEEYFKEKRVHFTQTVEVASAEAQRECVCAGLGVA 244

Query: 240 IAPDVVINNSPVRDKIQRLSV 260
           +     +N       ++ L V
Sbjct: 245 LLTRHAVNMELATGGLKELPV 265