Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional activator IlvY from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 86.3 bits (212), Expect = 8e-22
 Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%)

Query: 6   LQLFMHLCDCKNFSKTASAMHLSPSALSRQIQKLEQDLGHTLFLRDNRSVELTPAAHQLL 65
           L+L++H+ D  N +  A   HLS +A S +I+ +E  LG     R  R V  TPA   L 
Sbjct: 8   LRLYLHILDTGNITAGAGRSHLSLAAASARIRAMEASLGIECLERGRRGVTPTPAGKALA 67

Query: 66  PVAARIIHDWRQFTTELNDDSQELRGEIKLFCSVTASYSHLPELLSSFRLKHPYIEFKLL 125
             A  ++        +L + +  ++G+++L C+ TA   +LPELL+ F  +HP ++  L 
Sbjct: 68  RHARLLLQQAEHLQLDLAEYANGVKGQVRLLCNTTALSEYLPELLADFLCEHPNLDIDLQ 127

Query: 126 TGDPAQAIDKILHDEADIAISAMPEQLPSRIEFATISEIPLSVIA----PLGISSFMDEL 181
                +    +    AD+ I +        ++     + PL +I     P    SF+D L
Sbjct: 128 ELPSLRITQALRQGTADLGIVSDAVDTHG-LQTLPFRDDPLVLITPQDHPFSAGSFVDSL 186

Query: 182 QKEQPDWNEIPFIVPESG-TARDRANTWFKQMKIKPNIYAQIAGHEAIVSLVALGCGVGI 240
           Q       +   + P S  T            +++  I A+  G + ++ +VA G G+GI
Sbjct: 187 Q------YDFVGLAPHSALTVYLEEQALHAGFRLQTRIRAE--GFDGVIRMVARGAGLGI 238

Query: 241 APDVVINNSPVRDKIQ 256
            P   +   P+   ++
Sbjct: 239 VPQAALERWPLERSVR 254